Skermanella mucosa: JL100_005730
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Entry
JL100_005730 CDS
T07652
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smuc03021
]
JL100_005730 (rpoH)
Transcription machinery [BR:
smuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JL100_005730 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SHOCT-like_DUF2089-C
Sigma70_r4_2
HTH_11
SOAR
HTH_3
Motif
Other DBs
NCBI-ProteinID:
UEM22251
LinkDB
All DBs
Position
SKMUc:complement(1241392..1242261)
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AA seq
289 aa
AA seq
DB search
MQPSPSRTDLTRYLSRIREYPMLEAAEEQELARAWRDRRCPDAAERLIGSHLRLVAKVAR
GYSGYGLPMTDMIAEGNMGMVQALNGFDPDRGYRFTTYALWWIRAAMQEYILRSWSMVRM
GTTGAEKKLFFSLRRAKSAMNLLQEGDLSPEEARQLAETLKVPVADVTGMNGRLAGPDQS
LNLPLPGMEDGQAQDWLVDPSETQEELLAQRQEMDRRRKQLKRAMEQLQERERSILAARR
LAEEPLTLEDLSRQFGISRERVRQIEARAVEKLQRMMTGGRRMPSLAMA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcagccttcgccaagccggacggatctgacgcgttatctctccaggattcgcgagtat
ccgatgctcgaggcggccgaggagcaggaacttgcgcgggcctggcgtgaccgtcgctgc
ccggacgcggccgaacgcctgatcggcagccatctccgcctggtcgcgaaggtcgcccgc
ggctattccggctacggcctgcccatgaccgacatgatcgccgaaggcaacatgggcatg
gtccaggcgctgaacggcttcgacccggacaggggataccgcttcaccacctacgccctg
tggtggatccgggcggcgatgcaggaatatatcctgcggtcctggtcgatggtaaggatg
ggcaccaccggggcggagaaaaagctgttcttcagcctgcgccgggcgaagagcgccatg
aacctgctgcaggaaggcgacctgagccccgaggaggcccggcagctcgccgaaaccctg
aaggtgccggtcgccgacgtgaccggcatgaacggccggttggccggccccgaccagtcg
ctcaacctgccgctgcccggcatggaggacggccaggcccaggactggctggtcgacccg
tcggagacgcaggaggaactgctggcccagcgccaggaaatggatcgcaggaggaagcag
ttgaagcgggccatggaacagttgcaggagcgcgagcgctccatcctggcggcccgccgg
cttgccgaggagccgctgaccctggaggatctgtcgcgccagttcggcatcagccgcgag
cgggtgcgccagatcgaggcgcgggcggtcgagaagcttcagcgcatgatgaccggcgga
cggcgcatgccctccctggccatggcctga
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