Skermanella mucosa: JL100_007920
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Entry
JL100_007920 CDS
T07652
Name
(GenBank) TRAP transporter large permease subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
smuc
Skermanella mucosa
Pathway
smuc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JL100_007920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_007920
Transporters [BR:
smuc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JL100_007920
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
DUF6356
Motif
Other DBs
NCBI-ProteinID:
UEM24000
LinkDB
All DBs
Position
SKMUc:1735222..1736574
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AA seq
450 aa
AA seq
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MFFGVIGILLLGFPVAFTLAGTSLIIAGIGWLLDAFNPALFGTLASRYVGAMTNEVLVAV
PLFVFMGVMLERSRIAEQLLVTMAQLFGSLRGGLGLSVIMVGALLAASTGIVGATVVTMG
LLSLPAMLRAGYDPKLACGIICASGTLGQIIPPSTVLIFMGDILQGANAQAQMALGNFAP
NPVSVGDLFVGAFIPGFILVGLYMGWTILLAVVRPKSAPAMVMSADDRRDLPRNVAVALI
PALALIVAVLGSILAGIATPTESASVGAVGAMLLAAARRQFSYAILRHCMMATMQITSMV
FVILFGASMFALVFRTLGGDALLEEFLTALPGGATGAMLFVMGLMFVLGFILDTFEIIFI
VMPLTAPILLQMGVDPVWLGVMVGINLQTSFLTPPVGFSLFYLRSVAPPSVATGQIYRGV
IPFVLLQMAGLALVWWFPQLATWLPGIVFD
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcggcgtcatcggcatcctgctgctgggtttccccgtcgccttcaccctggcc
ggaacctcgctgatcatcgccggcatcggctggctgctggacgccttcaatccggcgctg
ttcggcaccctggcgtcgcgctatgtcggcgccatgaccaacgaggtgctggtcgcggtg
ccgctgttcgttttcatgggcgtgatgctcgaacgctcccggatcgccgagcagcttctg
gtcaccatggcgcagctgttcggcagcctgcggggagggctcgggctgtcggtcatcatg
gtcggcgccctcctggccgcctcgaccggcatcgtcggcgctaccgtcgtgaccatgggc
ctgctcagcctgccggcgatgctgcgggccggctacgacccgaagctggcctgcggcatc
atctgcgcgtccggcaccctcgggcagatcattcccccctcgaccgtcctgatcttcatg
ggcgacatccttcagggggcgaacgcccaggcccaaatggcgctcggcaacttcgcgccc
aatccagtctcggtcggcgacctgttcgtcggggccttcatcccgggcttcatcctggtc
ggcctctacatggggtggaccatcctcctcgcggtcgtgcggcccaaatccgcccccgcc
atggtgatgtcggccgacgaccggcgcgacctgccgaggaacgtggccgtggcgctgatc
ccggcgctggcattgatcgtggcggtgctcggatcgatcctggccgggatcgccacgccg
acggagtcggcgtcggtcggcgcggtcggcgccatgctcctcgccgcggcgcgccggcag
ttcagctacgcgatcctgcgccactgcatgatggcgaccatgcaaatcacctcgatggtg
ttcgtcatcctgttcggcgcgtccatgttcgccctggtctttcggacgctgggaggggac
gccctgctggaggagttcttgacggccctgccgggcggggccaccggggcgatgctgttc
gtgatggggctgatgttcgtcctgggcttcatcctggacaccttcgagatcatcttcatc
gtcatgccgctgacggcgccgatcctgctccagatgggagtcgatccggtctggctcggg
gtcatggtcggcatcaacctccagaccagcttcctgaccccgccggtgggcttctcgctg
ttctacctgcggagcgtcgcgccgccatcggtggcgacgggccagatctatcgaggcgtc
atcccgttcgtcctgctccagatggccgggctggccctggtatggtggttcccgcagctt
gccacttggctgcccggcatcgtcttcgactag
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