Skermanella mucosa: JL100_008390
Help
Entry
JL100_008390 CDS
T07652
Name
(GenBank) FG-GAP-like repeat-containing protein
Organism
smuc
Skermanella mucosa
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
FG-GAP_3
FG-GAP
PT-HINT
SpvB
TcdB_toxin_midN
DUF6443
Hint_2
DUF4126
Motif
Other DBs
NCBI-ProteinID:
UEM22749
LinkDB
All DBs
Position
SKMUc:1849599..1856444
Genome browser
AA seq
2281 aa
AA seq
DB search
MDTRHSPCCRLRTLLRGIVATLCLAAMTGPGGAQVSAPAASYQPADAFGTIDATFSVSPN
GSGVYAMPIEVPPGTNGVEPSLTLRYDSQAPDGLLGVGFSLDGLSQITRCAANRAVDGYD
GAVNIDSDDRFCLDGQRLIKVSGDGEYGAAGSVYQTQMQSWTRVTANGTCGTGPCSFTAV
TRQGWTMGFGTTPDSALPLSGRSEKYSWQVATITDLNGNAIDFFYTLNQNTNQSYPDRIE
YTRNDSAGRQAQRKIVFGYQNRSSWPNKYKAGLLFKTDKTLTTITTEVSGATVLTYTLSY
GTGATGRPVVSQVRKCSGSGDCLPATAFSWSTSANQVSSANTRANGQLNSNTFCAGSGGR
WSWSDFNGDGMLDATCVDASGAQYALVSDGSYLKTPNSQASGLLTSVKWCTGSQDISVWP
DFNGDQMADSACIAADGSVSVLKSDGKYLSTVNSQATGLVRSQWCPASSCRAMVGNFDND
GRADFLCSCDSGTQMVMVSDGKSVSTPNGNANGTVLTGWCANPASHRLTADFNDDGKADL
ICAAPGGNISVQVANSTSTALKSPNNDAAGAVVSGWCGGSGQSLSTVDFNRDGNDDLYCR
GTDGSHRILLSTATTVKPPAGASADGLLLTGWCAGSTASVSWNDFNGDGLPDLLCSDQSG
TQSVKLSTGTQLKDATNSSGGVVATGYCSGAGSTGGLGDFNGDGYADLLCRQDSGIQSAM
VRKAPFNDLVTGVTNGLGGGVDIAYSPITDPSVYTRTTATDYPDLTVESQLQVVKTYTRR
DGRGWSTTYRNEYTNLMTDLDQGQWLGFETLTVIEEATGRKMTNRMAQEFPQQGFVTQTD
GYDGSGALFQTTVHSPVTIEPYPGVYQVLNRKTVRTFYQDGGVAYTTEDDYEYDGYGNLV
FHAGLGDPTRAEQAVYDCSTFENDPAAWRLGYLTATKTTGSESSCRDFLAAAEPAWTAGA
DLSLARIGYDARYNVTSQADWDDVNAVWVTSAMTYDGFGNVITTTDPAGNTTIVTYDADY
QTFPATSTSPPTANAGPLVTATAYDAAFGVQTSMTDPNGRVFSVVLDSLGRQVKSYGPDE
SGASSDPVQLSAVSFSEDGDGIYTETRRRRDWSNGDTATWAWQRDYIDGLNRPTQTVQGG
ETTETSIVTGTQYDTSGRPYKVSPPRFRNAAPSWAEVEYDSLNRPILETLPDGTRTETAY
GQGGLLVTVTVGAGTPDARTSQATLDTRSNVLKRVDPNQAVTTSSYDPIGRMTSTTGPVG
NVTRNSYDSLGHLIAQADADAGSQTWTYDGAGRMVGSVDGSGNRTTLVYDSLGRITSRAV
ASADGGATVTTTLDYDQSASANGKGRLTTVTRPDSVETFGYSDYGLVGSEVLTLAGSTFS
LATSYDPLGQPIDMTHPDGSVTRNAYDILQRISSVAFRDVGETAFTTYGSYPGYTALNQP
TSIAYNNGLTTTNAFYPYETGMGRLQSFSLASGGATDAFSADFTWNAFGQLTQVARKRDG
ATTGSTGYTYEDTGWLSQAAGSSGTFAFSYDLAGNIALKDGVTYARTPNTNRLASASNGL
TAAFDGNGAMTARVLDKQAWCYRYDPEANLATVLSGQADGTADGACADTSGYSTVAQASY
DASGRRLVRTDPDGTVNLYVSTDFEELRRDGQVYQTRYLVGPEGRFAALTRQVTPAEEAG
AAASAGGGYPTPGIYFTFGDQVDSTFLVTDAAGKEVAQVGYRPFGTIDPSVTTGADNFRV
KFGGKELDENTDLYYFLSRYYSDELGQFTKPDPARQFSSPYLYAANDPQSLTDPDGEFVE
LVVLAVGVAAGAYFGGSAADHSYNPADWNWHSARTYEGLFAGAAIGAVGAEVGAAFAEAG
VAPAILGGMLLGGTENAAYAGIANEPPEGIAMAALTGAVLGGVTEGVLAGGGAMMAEAGS
RMAGRGYSRLESAADVDAPEGAAWEGQGPCASFSAGTLVATTEGTVPVEQIRPGSYVLSR
GAEGESAEPRLVLRTYRRMADDAVRFTAGDTVIRTTAQHPFWVEGKGWTVAGALAAGDVL
ATLEAGGAAVERVEKASAPEPVYNFAVSGSQSYFVSGLKLWAHNAPSKSCAVAGKPKAFK
AAGNAKHTAGAPAATGNGRGLTLEALSAPKAKTYFNVKTGIKETLYHDYVLSVSKSSYGE
AAEHMRHYIEVQKGVPVWSVERTGAKVRRKFALKGIPTKPKLDRDEIPMAMFQQGGGNGS
YLSSVRHIDVSSNRSLGSAIGHALKGLPNQTRVLIRMVAYRRHRSAAGMAAPRPRRRFRA
A
NT seq
6846 nt
NT seq
+upstream
nt +downstream
nt
atggatacccgccactccccttgctgccgtctgcggaccctgcttcggggaatcgtcgcc
accctttgcctcgcggcgatgaccggtcccggcggtgcgcaggtatccgccccggcggcg
tcctaccagccggccgatgcgttcggcaccatcgacgcgacgttctcggtcagccccaac
gggtcgggcgtctacgcgatgcccatcgaggtgccgcccgggaccaacggcgtcgagccc
agcctgaccctgcgctacgacagccaggcgccggacgggttgctcggcgtggggttctcg
ctcgacgggctttcccagatcacccggtgcgcggccaacagggccgtggacggttatgac
ggcgccgtcaatatcgactcggacgaccggttctgcctcgacggacagaggctgatcaag
gtttcgggcgacggcgaatatggtgccgccggttcggtctaccagacccagatgcagagc
tggacccgggtgaccgccaacggcacctgcgggaccggtccctgctcgttcacggcggtg
acccggcagggctggaccatgggcttcgggacgacgccggattcggcccttccgctgtcg
ggcaggtcggagaagtattcctggcaggtcgcgacgatcaccgatctcaacggcaacgcc
atcgacttcttctacacgctcaatcagaacacgaaccagagctatcccgaccggatcgag
tacacgaggaacgactccgccggtcggcaggcccagcgcaagatcgtcttcggctatcag
aaccggtccagttggccgaacaagtacaaggccggcttgctgttcaagacggacaagacc
ctgacgaccataacgactgaagtgtccggcgcgaccgtcctgacctacaccctgtcctac
gggacaggagcgaccgggcggccggtcgtctcgcaggtccggaaatgctcgggctcgggc
gactgcctgccggcgaccgcgttctcgtggtcgacctccgccaaccaggtgtcgtccgcc
aatacccgcgccaacggacagctcaattcgaacacgttctgcgcgggcagcggcgggcgg
tggtcatggtcggacttcaacggcgacggcatgctggacgcgacctgcgtcgatgcgtcg
ggcgcccagtacgcgctcgtctccgacggcagctatctcaagaccccgaacagtcaggcg
agcggactgctcacttcggtcaaatggtgtaccggatcgcaggacatcagcgtctggccc
gacttcaacggcgaccagatggcggactccgcctgcatcgccgcggacggttcggtcagc
gtgctcaaatcggacggcaagtacctgtccacggtcaacagccaggccaccgggctggtc
cggtcgcagtggtgcccggcttcctcctgccgggcgatggtcggcaatttcgacaatgac
gggcgcgccgatttcctgtgcagttgcgacagcggcacccagatggtgatggtcagcgac
gggaaatcggtctcgacgccgaacggcaatgccaacggcaccgtcctgaccggctggtgc
gccaatccggcatcgcaccggctgaccgccgatttcaatgatgacggcaaggccgacctg
atctgcgcggcgccgggcgggaacatctcggtccaggtcgccaactcgacctccaccgca
ttgaagagccccaacaacgacgccgccggagccgtcgtgtcgggctggtgcggcggttcg
ggccagtcgctttcgacggtggacttcaaccgcgacggcaacgacgatctttattgccgg
ggcaccgacggcagccacaggatacttctctccaccgcgaccaccgtgaagcctccggcc
ggcgcgtcggccgacgggctgctgctgaccggctggtgtgccggcagcaccgcatcggtg
agctggaacgatttcaacggcgacggcctgcccgatctcctgtgcagcgaccagagcggc
actcagtcggtgaagctttccaccggaacccaactcaaggacgccaccaattcctccggg
ggagtggtcgccaccggctattgctcgggcgccggctcgaccgggggactgggcgacttc
aacggcgacgggtacgccgacctgctctgccgtcaggacagcggcatccagtcggcgatg
gtgcggaaggccccgttcaacgatctggtcacgggggtcaccaacggcctcggcggcggc
gtcgatatcgcctacagcccgatcacggacccgagcgtctatacccgcaccaccgcgacc
gactatccggacctgaccgtcgagagccagctccaggtcgtcaagacctacacgcgccgc
gacggccggggatggtcgacgacctaccggaacgaatacaccaacctgatgaccgacctc
gaccagggccagtggctcggcttcgagacgctcacggtcatcgaggaggccaccggccgc
aagatgaccaaccggatggcgcaggagtttccgcaacagggcttcgtgacccagaccgac
ggatacgatgggtcgggcgcgctgtttcagaccaccgtccattccccggtcacaatcgag
ccctatcccggcgtctaccaggtcctgaaccggaagaccgtccgtaccttctaccaggat
ggcggcgtggcctacacgaccgaggacgactacgaatacgacggctacggcaacctggtc
ttccatgccggcctcggagacccgacgagggccgaacaggcggtctacgactgctcgacc
ttcgagaacgatcccgccgcttggcggctcggatacctgaccgcgaccaagaccaccgga
agcgaaagctcctgccgcgatttcctggcggcggccgaacccgcctggaccgccggggcc
gacctgagcctcgcgcggatcggctacgacgcccgctacaacgtgacatcccaggccgac
tgggacgacgtcaatgccgtctgggtcacctcggcgatgacctatgacggcttcggcaac
gtgatcaccacgacggatccggcgggcaacacgaccatcgtcacgtacgacgccgattac
cagaccttccccgcgaccagcacgtcccctccgaccgccaatgccgggccgctcgtcacg
gcgacggcctacgatgccgcgttcggtgtccagacctccatgaccgaccccaacggcagg
gtcttctcggtcgtgctggacagcctcgggcggcaggtgaagtcctatggtcccgacgag
agcggcgccagctccgatccggtgcagttgtcggcggtgtccttcagcgaggacggggac
ggcatctacaccgagacgcggcggcggcgcgactggtccaacggcgacaccgccacctgg
gcgtggcagcgcgactatatcgacgggttgaaccggcctacccagaccgtccagggaggc
gagaccaccgaaacgtcgatcgtcaccggcacgcagtacgacacctccggccgtccgtac
aaggtgtcgccgccgcgtttccggaacgccgctcccagttgggcggaggtcgagtacgac
agcctgaaccggccgatcctggagaccctgcccgacgggacccggacggaaaccgcctac
ggccagggcgggcttctggtgacggtcacggtcggtgccggtacgcccgacgcgcggacg
agccaggcaaccctcgacacgcgcagcaacgtcctgaagcgggtggaccccaatcaggcg
gtcacgaccagcagctacgacccgatcggacgcatgacatcgacgaccgggccggtcggg
aacgtcacgcggaacagctatgactctctcggccacctgatcgcccaggccgacgccgat
gccggctcgcagacctggacttatgacggtgccggccggatggtcggctcggtggatggt
tcgggcaatcggacgacgcttgtttacgacagcctcggccggatcacgtcgcgggccgtg
gcgtcggccgacggcggggccaccgtcaccaccacgctggattacgaccagtcggcgtcc
gccaacggcaaggggcggctgaccaccgtgacgcggccggactcggtcgagacgttcggc
tactcggattacggcctcgtcggttcggaagtcctgaccctggcgggctcgaccttttcc
ctggcgacgagctacgatccgctcggccagccgatcgacatgacccaccccgacggatcg
gtgacccgcaacgcctacgacatccttcagcggatatcgtccgtggctttccgggacgtc
ggggagaccgcgttcacgacctatggaagctatcccggctacaccgccctgaaccagccg
acgtcgatcgcctacaacaatggcctgacgacgaccaacgccttctatccctatgaaacg
gggatgggcaggctccagagcttttcgctggcttccggcggcgcgacggacgccttctcc
gccgacttcacctggaacgcgttcggccagctcacgcaagtcgcccggaagcgcgacggt
gccacgaccgggagcaccggctatacctacgaagacaccggctggctcagccaagcggcg
ggctccagcggcaccttcgccttctcctacgacctggccggcaacatcgcgctgaaggac
ggcgtgacctatgcccgcacgccgaacaccaacaggctcgcctccgccagcaacgggctg
acggccgccttcgacggcaacggtgccatgacggcgcgggttctcgacaagcaggcatgg
tgctaccggtacgatccggaggcgaacctggcgacggtcctcagcggccaggccgacggc
acggccgatggcgcctgcgccgatacctccggctattcgaccgtcgcgcaggcgtcctac
gacgcgagcggacgccgcctggtcaggaccgatccggacgggacggtgaacctctacgtc
tccaccgatttcgaggaactgcgccgggacgggcaggtctaccagacccgctacctggtt
ggcccggaaggccgtttcgccgccctgacccggcaggtcacgcccgcggaagaggccggc
gccgcggcatcggccggcggcggctatccgacgccggggatctatttcaccttcggggac
caggtggacagcaccttcctggtgaccgacgccgccggcaaggaggtggcgcaggtcggc
tatcggccgttcgggacgatcgacccgtccgtcaccaccggggccgacaatttccgcgtc
aagttcggcgggaaggagctggacgaaaataccgacctgtactacttcctctcgcgttac
tacagcgacgagctggggcagttcaccaagcccgatccggcgcggcagttctccagcccc
tatctgtacgccgccaacgatccgcaatcgctgaccgatccggacggggaattcgtcgag
ctggtggtgctggcggtcggcgtggcggccggggcctatttcggcggctcggctgccgac
catagctacaatccggcggactggaactggcacagcgcccgaacctacgagggcctgttc
gccggcgccgcgatcggagcggtcggggccgaggtcggcgccgctttcgccgaggccggg
gtggctcccgcgatcctcggcggcatgctgctgggcggcaccgagaacgccgcctatgcc
gggatcgccaacgaaccgccggagggcatcgccatggcggccctgaccggcgccgtgctg
ggcggcgtgaccgagggggtgttggccgggggcggcgcgatgatggcggaggccggcagc
cggatggccggccgcggctactccaggctcgaaagcgccgccgacgtcgatgctcccgag
ggagccgcctgggaggggcagggaccctgcgccagcttctccgcggggaccctggtggcc
accacggagggcaccgtgccggtcgagcagatccggccgggaagctacgtgctgtcccgg
ggcgccgagggggagtccgccgagcccaggctcgtcctgcgcacctaccggcgcatggcg
gacgacgccgtccggttcacggctggggataccgtcattcggaccaccgcccagcatccg
ttctgggtggagggcaagggctggaccgtggcgggggcgctcgcggccggcgacgtcctg
gcgaccctggaggccggcggcgccgcggtcgagcgggttgaaaaggcgtccgccccggag
ccggtctacaacttcgccgtcagcggcagccagtcctacttcgtttccggcctgaagctc
tgggcgcacaatgcgccgtcgaaatcctgtgccgtggccggaaagccgaaagccttcaag
gcggccgggaatgcgaagcacacggcaggtgccccggccgccaccggcaacggccggggt
ttgaccctggaagcgctttcggcgccgaaggcgaagacctacttcaacgtcaagacgggc
atcaaggagacgctctaccacgactacgtattgtcggtgagcaagtccagctacggcgag
gcggccgaacacatgcggcactatatcgaggtccagaaaggcgttccggtctggtccgtc
gagcgcaccggcgcgaaggtcaggaggaagttcgcgctgaagggcattccgacgaagccc
aagctggaccgtgacgagatcccgatggcgatgttccagcagggcggcggaaacggcagc
tatctcagctcggtccggcacatcgacgtcagttcgaacaggtccctggggtcggcgatc
ggccatgccctgaaggggttgccgaaccagacgcgcgtcctgatccgcatggtggcctac
cggcgccaccgctccgccgcggggatggcggcgcctcgtccgcgccgccggttccgggcc
gcctga
DBGET
integrated database retrieval system
