Skermanella mucosa: JL100_008705
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Entry
JL100_008705 CDS
T07652
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smuc01011
]
JL100_008705
Enzymes [BR:
smuc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
JL100_008705
Peptidoglycan biosynthesis and degradation proteins [BR:
smuc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
JL100_008705
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Gene cluster
GFIT
Motif
Pfam:
SLT
RE_Alw26IDE
Motif
Other DBs
NCBI-ProteinID:
UEM22808
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All DBs
Position
SKMUc:complement(1916504..1918180)
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AA seq
558 aa
AA seq
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MEAPVVPSRQTRATAHDSQLTVQEAARYRRIFELQDAGDWDAADRLVGQVTDMRLIGHVE
YQRLMHPSYKATYHELRGWLERFADHAGADKVYQLALRRMARGERKPPAPRGVAASLPAG
QNGAYASDRGLQAAVPRRGEAVQAPIQAAKAAGDGPVLPAGAVTVAASAAVAAPPKPEPA
SPASGAGSWSAGIAAWRIGQDDKAARHFQAFAQSDSASPWDRSAGAYWAARAHQRARRAD
EAARWLGEAAKHPRTFYGLIARQALGNISDAGLRVPILTRRHVRVLAEHPAGRRAIALVQ
AGRRESAEQELRRIEARGNATLEEALVALADMAGMPSLAMRLGSVLTDSDGTAYDSALYP
LPPWEPRGGFTVDRALLFALMRQESRFEPDARSGAGARGLMQLMPNTASYVADKLTPDIL
DSIQLNSPRGKPDLYEPEVNLTLGQHYVRYLMDQKGIGDNLILTVAAYNAGPGNLQRWRR
RLSRIKDPLLFIESLPVRETRTFVEQVLTNYWIYSQRLGRPLPSLEAIAGGRWPVYMAVD
GEVPTPKAVQQVASDGKD
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtggaggccccggtcgtacccagccggcagacccgcgccaccgcccacgattcgcagctt
acggtgcaggaagcggcgcgctaccgccggatcttcgagcttcaggatgccggcgactgg
gacgccgccgacaggctggtcggccaggtgaccgacatgcgcctgatcggccatgtcgag
taccagcggctgatgcatccctcctacaaggccacctaccacgagcttcgcggctggctg
gagcggttcgccgaccatgccggcgccgacaaggtctatcagctggccctgcgccgcatg
gcccggggcgagcgcaagccgccggccccgcgcggcgtggctgcctccctccccgccggg
cagaacggcgcctatgcttccgaccgcggactccaggccgccgtcccgcgccgcggagaa
gcggtccaggccccgatccaggccgccaaggcggcgggggacggccccgttctgccggcc
ggtgccgtgacggtcgccgcgtcggcggccgtggccgctcctcccaagccggaaccggcg
tcccccgcgtccggcgcgggaagctggagcgccggcatcgcggcctggcggatcgggcag
gacgacaaggccgcccggcacttccaggccttcgcccagtccgactcggcatccccctgg
gaccgttcggccggcgcctactgggccgcccgggctcaccagcgcgcccggcgcgccgac
gaggccgccagatggctgggcgaggcggcgaagcatccccggaccttctacggcctgatc
gccaggcaagccctcggcaacatctccgacgccggcctgcgggtgccgatcctgacgcgg
cgccacgtccgcgtcctggccgagcatccggccggccggcgcgccatcgccctggtccag
gccggccggcgcgagagcgccgagcaggaactgcgccgcatcgaggcgcgcggcaacgcg
acgctggaagaggcgctggtcgccctggccgacatggccgggatgccgtcgctcgccatg
cggctcggcagcgtgctgaccgactcggacggaacggcctacgactcggcgctctatccc
ctgcccccgtgggaaccgcgcggaggcttcaccgtggaccgcgcgctgctgttcgccctg
atgcgtcaggaaagccggttcgagccggacgcgcggagcggcgccggtgccaggggcctc
atgcagctgatgcccaacaccgccagctatgtcgccgacaagctgacgcccgacatactg
gattccatccagctgaactccccccggggcaagccggacctgtacgagccggaagtcaac
ctgaccctgggccagcactatgtgcgctatctgatggaccagaaggggatcggggacaac
ctgatcctgaccgtcgccgcctataacgccggcccggggaacctccagcgctggcggcgc
agactgtcccggatcaaggacccgctgctgttcatcgagagcctgccggtccgcgagacg
cgcaccttcgtcgagcaggtgctgaccaattactggatctacagccagcgcctgggccgg
ccgctgccgtccctggaggccattgcgggcggccggtggccggtttatatggctgtggac
ggcgaggttcccacgccgaaggcagttcagcaggtggcttccgatggcaaagattga
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