Skermanella mucosa: JL100_008730
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Entry
JL100_008730 CDS
T07652
Name
(GenBank) IS1380 family transposase
Organism
smuc
Skermanella mucosa
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Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_1_4
DDE_Tnp_1
DDE_Tnp_1_assoc
DUF5538
Motif
Other DBs
NCBI-ProteinID:
UEM22813
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Position
SKMUc:complement(1923582..1924931)
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AA seq
449 aa
AA seq
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MPATVELTPSLPGLSPVAGKPVVARFDGGRLSSDAGVLGLREIEKRLGIADRLAACLEDP
RTPGRIVHGLAEIIRFRLLMIAAGYEDGNDADSLRRDPAFKLALDRLPDDAGLCSQSTIS
RLENLPDTRALLRMGRALVDFYCAGFRQVPKRIVLDIDDTFDAVHGEQQLRLFNGHYDEY
GFQPIVVFDEHGRFVTAILRPARRPKGTEIRAHLRRIVRQIRANWPQVEILLRADSHYCC
PEVLNWCRANRLDYVLGLAPTSTLRRHILDLEASTAARFAAGPGTAKVRRFKEFYDAAGS
WSRTERIIARVEVGPQGPDTRFIVTSLRHGRGRWLYEKLYCARGQAENHIKSWKAHLCAD
RTSCHKATANQFRLFLHAGAYWLLWSMRALMPRRSRWRVAQFDSLRLRLIKLAARIVETR
RQILVHLPTACPEQTVLRLLLERVPRLVT
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccacagttgaacttaccccatcgctgcccggcctgtcacctgtcgccggcaag
cccgtggtcgcccgcttcgatggcgggcggctgtcctccgatgccggcgtgctgggcctg
cgggagatcgagaagcggctcgggattgccgaccggcttgcggcgtgcctggaagacccc
cggacgcccgggcggatcgttcatggactggcggagatcatccgcttccgcctgcttatg
atcgcggccggctacgaggacggcaacgacgccgacagcctgcgccgggatccggcgttc
aagctggcgctcgaccgcctgccggacgatgctggcctgtgctcgcagtccaccatctcg
cgcctggagaacctgcccgatacccgcgccctgctgcgcatgggccgcgctctggtcgat
ttctactgcgccgggttccggcaggtcccaaagcggatcgtgctggatattgatgacacc
ttcgatgccgttcacggcgagcagcaactgcgtctgttcaatggccattacgacgagtac
ggcttccagccgatcgtcgttttcgacgagcacgggcgcttcgtcaccgccatcctgcgt
ccggccaggcgacccaaaggcactgagatccgggcgcacctgcgtcggatcgtgcggcag
atccgggccaactggccgcaggtcgagatcctgctgcgcgccgacagtcattactgctgc
cccgaggttctgaactggtgccgggccaaccgcctggactatgtgctcggcctggcgcca
accagcacgctgcggcggcatatcctcgacctggaggccagcaccgccgcccggttcgcc
gccggtcccgggaccgccaaggtccggcgcttcaaggaattctacgacgccgccggaagc
tggagccggaccgagcggatcattgcgcgcgttgaagtcgggccgcagggcccggacacc
cgcttcatcgtcaccagcctgcgccacggccgggggcggtggctctatgagaaactctat
tgcgcccgcggccaggcggaaaatcacataaagagctggaaggcgcatctgtgcgccgac
cgcacctcctgccacaaggccaccgccaaccagttccggctgtttctgcatgccggcgcc
tactggttgctgtggtcgatgcgcgccctgatgccgcgccggtcgcgctggcgagtcgcc
cagttcgactcgttgcgcctgcgtttgatcaaactggcggcccggatcgtcgagaccagg
cggcaaatcctcgtccacctgcctaccgcctgcccggagcaaactgtcctgcgcctgctc
ctggagcgggttccccgactcgtcacctga
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