Skermanella mucosa: JL100_009835
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Entry
JL100_009835 CDS
T07652
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
smuc
Skermanella mucosa
Pathway
smuc02020
Two-component system
smuc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JL100_009835
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL100_009835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smuc03000
]
JL100_009835
Transcription factors [BR:
smuc03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
JL100_009835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HVO_A0261_N
GntR
MarR
HTH_Cmi2_C
TrmB
MarR_2
Rrf2
Motif
Other DBs
NCBI-ProteinID:
UEM23020
LinkDB
All DBs
Position
SKMUc:complement(2171297..2171995)
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AA seq
232 aa
AA seq
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MSEVQAASLDRIDLLASLTPEERAAIVRQCSWRRYKADEQIIDHLSGTRDACLVVEGRVR
VVMFSLSGREISFDDVSAGGYMGELSALDGDPRSATVVALTDTLIAFVPPRLFQEIVTTH
PKVALMLMQRMAAVIRSATGRIMDLSTLGANNRVHAELVRLAKPGLKPDNTAEISPIPVH
GDIASRVSTTRETVARVLSDLARSGIVERRSHALVVKDYSRLVDMVEEVRGE
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggaagtgcaggccgcctcgctagaccggatcgatctgctcgcgtccctgacgccg
gaagaacgcgccgccatcgtccgccagtgcagctggcgccgctacaaggcggacgagcag
atcatcgaccatctcagcgggacgagggacgcctgcctggtggtcgaaggccgggtgcgc
gtcgtgatgttttccttgtccgggcgggagatcagcttcgacgacgtttccgccgggggt
tacatgggcgagctttcggccctggacggcgacccgcggtccgcgaccgtggtggcgctg
accgacacgctgatcgccttcgtcccgccccgcctgttccaggagatcgtgacgacccat
cccaaggtggcgctgatgctgatgcagcggatggccgcggtcatccgaagcgccaccggc
cggatcatggatcttagcacgctcggggccaacaaccgggtccatgccgaattggtccgc
cttgccaagcccgggctgaaacccgacaacaccgcggagatctccccgattcccgtccat
ggcgacatcgcgagccgggtcagcacgacccgggagacggtcgcccgcgtgctcagcgac
ctcgcccgcagcgggatcgtcgagcgacgcagccatgcgctcgtcgttaaggattattcg
cggctggtcgatatggtggaggaagtccggggcgagtga
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