Skermanella mucosa: JL100_009875
Help
Entry
JL100_009875 CDS
T07652
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
smuc
Skermanella mucosa
Pathway
smuc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL100_009875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_009875
Transporters [BR:
smuc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JL100_009875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
ABC_ATPase
AAA_28
AAA
TOBE
SMC_N
AAA_16
AAA_22
ORC-CDC6-like
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UEM23027
LinkDB
All DBs
Position
SKMUc:complement(2181219..2182226)
Genome browser
AA seq
335 aa
AA seq
DB search
MAGPADIELAAVTKMYGPVTAVDSIDLRIPAGTYCCLLGPSGCGKTSTLRMIAGHESVTD
GDILLGDTHINDLPPARRGTAMMFQSYALFPHLTCVDNVAFSLKLKGVSKPERRAKAMDL
LGLVQMDKYAERLPAQLSGGQQQRVALARALITNPSALLLDEPLSALDPFLRVKMREELK
RLQRELGISFIHVTHGQEEALALADLVVVMNNGRIAQAGSPREVFNRPRDAFVARFIGGH
NVLSFLDGAAGRQFAVRTDKIRLLHDQSTAGPNSFTGTVRLVEYQGPMVHLRLASPGVEE
FAVTVTEQAFFAAPLNAGDRVTAVWAGEDMHPLAA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggccggaccggcggatatcgaactcgctgcggtcaccaagatgtatgggccggtaacg
gcggtcgactcgatcgaccttcgcattccggcgggaacctattgctgcctcctgggaccc
agcggctgcggcaagacttcgacgctccggatgatcgcgggacatgaatccgtaaccgac
ggcgacatacttctcggcgatacgcacatcaacgacctgccgccggcccggcgcggcacg
gcgatgatgttccagagctacgcgctgttcccgcacctcacctgcgtggacaacgtcgcc
ttcagcctgaagctgaagggggtctccaagcccgagcgccgggccaaggcgatggacctg
ctcggactggtccagatggacaagtatgccgagcggctgcccgcccagctttccggcggc
cagcagcagcgggtcgccctcgcccgggcgctgatcaccaaccccagcgccctgctgctg
gatgagccgctgtctgcgctcgaccccttcctgcgggtcaagatgcgggaggagctgaag
cgcctccagcgcgagcttgggatcagcttcatccacgtcacccacggccaggaggaagcc
ctggcgctggccgacctggtcgtcgtgatgaacaacgggcggatcgcccaggccggctcc
ccgcgcgaggtgttcaaccggccgcgcgacgccttcgtcgcccgcttcatcggcggccac
aacgtcctgtcgttcctcgacggcgccgccggccggcagttcgccgtccggaccgacaag
atccgcctcctgcacgaccagtccacggccggacccaacagcttcaccggcacggtccgt
ctggtcgagtaccaggggccgatggtccatctgcgcctggcgtccccgggcgtcgaggaa
ttcgccgtgaccgtcaccgaacaggccttcttcgcggcccctctcaacgccggcgacagg
gtaaccgccgtctgggccggggaagacatgcacccgctcgccgcctga
DBGET
integrated database retrieval system
