Skermanella mucosa: JL100_010045
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Entry
JL100_010045 CDS
T07652
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
smuc
Skermanella mucosa
Pathway
smuc03410
Base excision repair
smuc03430
Mismatch repair
smuc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JL100_010045 (recJ)
03430 Mismatch repair
JL100_010045 (recJ)
03440 Homologous recombination
JL100_010045 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smuc03400
]
JL100_010045 (recJ)
DNA repair and recombination proteins [BR:
smuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
JL100_010045 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JL100_010045 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JL100_010045 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UEM23059
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All DBs
Position
SKMUc:2218052..2219842
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AA seq
596 aa
AA seq
DB search
MSSQQAFLNVTRSLGGRRWIARPSDERTALALAQSHGLPELVGRVLSARGVDLPTAENFL
SPTLKALLPDPSHLKDMDAAADRIARAIRSGERVAVFGDYDVDGATSSALLRRFFRAAGA
DLSVYIPDRIAEGYGPNAPALIRLKEKGISLVVTVDCGVTAFDPLAAAAAAGLDVVVVDH
HAAEPRLPQAVAVVNPNRVDDASPHKTLAAVGVTFLLVVALNRALRDAGWWSAGRPQPDL
LGWLDIVALGTVCDVVPLVGLNRALVSQGLRVMARRSNPGITALSDLCKLAEKPDAWHAG
YILGPRVNAGGRVGASDLGARLLSTDDPAEAADLARILDQHNTERRAIEAAVVEEAMVQV
EAALEDLGGLVFAVGEGWHPGVIGIVAARLKERYNRAACVVALDKGIGKASGRSVRGVDL
GAAVIAARHAGLLIAGGGHRMAAGFTAAAERLPELKRFLSDRIAAQQEGGPLAPTLELDG
VLSVGGATPGLVGTLAKLGPFGTGNSEPRFALADARIAHASVVGENHVRCILTSGGGERL
KAIAFRALDSDLGKGLLKSGGAPLHVAGHLRPDNWQGRNEVQLMIEDAAPVWGTAG
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
gtgagttcgcaacaggccttcctgaacgttacccgctcgctcgggggccggcgctggatc
gcccggccgtccgacgagcggactgccctggcgctcgcccagagccacggcctgccggaa
ctggtgggccgcgtcctctcggcgcgcggcgtcgatctgcccacggcggaaaatttcctg
tcgccgacgctcaaggcgttgctgcccgaccccagccacctgaaggacatggacgccgcg
gccgaccggatcgcgcgcgcgatccggtccggcgaacgggtggcggtgttcggcgactat
gacgtggacggcgccacttcgtcggccctgcttcgccgtttcttccgggcggcgggggcg
gacctgtccgtctacatccccgaccggatcgcggagggctacggccccaacgcgccggcg
ctgatccgcctgaaggaaaagggcatcagcctggtggtcacggtcgattgcggcgttacc
gccttcgatccgctggccgccgccgccgctgcggggctcgacgtggtcgtggtcgaccac
cacgccgcggagccgcgcctgccgcaggcggtcgcggtggtgaaccccaaccgggtggac
gacgcctcgccgcacaagaccctggcggcggtcggcgtcaccttcctgctggtcgtggcg
ctcaaccgcgcgctgcgggatgccggctggtggtcggcgggccggccgcagccggacttg
ctgggctggctcgacatcgttgccctggggacggtatgcgacgtggtgccgctggtcggc
ctcaaccgcgccctggtgagccaggggctcagggtgatggcgcggcggtccaatccgggc
atcaccgccctttccgacttgtgcaagctggcggagaagccggacgcctggcatgccggc
tatatcctggggccacgggttaacgccggcggccgggtcggcgcgtccgacctgggtgcc
cggctgctctcgaccgacgatccggccgaggccgccgatctggcgcgcatcctcgaccag
cacaataccgagcgccgcgccatcgaggcggccgtggtcgaggaggccatggtccaggtc
gaggcggcgctggaggatctgggcgggctggtcttcgccgtcggcgagggctggcacccg
ggggtgatcggcatcgtcgccgcccgcctgaaggagcgttacaaccgcgcggcctgcgtc
gtggcgctggacaagggcatcggcaaggcttcgggacggtcggtgcgcggcgtcgacctg
ggagcggcggtgatcgccgcgcgccatgccggcctgctgatcgccggcggcggccaccgc
atggcggcgggcttcaccgcggcggccgagcggctgccggagctgaaacgattcctgtcc
gaccgcatcgccgcccagcaggagggcggaccgcttgccccgaccctggagctggacggc
gtgctgtcggtggggggagccacgcccggcttggtcggtacgctggccaagctgggtccc
tttggcacaggcaattccgagccccgcttcgcgctggccgacgcccgcatcgcccatgcc
agcgtggtcggcgagaaccatgtccgctgcatcctgaccagcggaggcggcgagcgcctg
aaggccatcgcgttccgcgcgctcgacagcgacctgggcaagggcctgctcaagagcggc
ggcgcgccgctgcatgtcgccggccatctgcgccccgacaattggcagggccggaacgag
gtccagctgatgatcgaggatgccgccccggtctggggcaccgctggctga
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