Skermanella mucosa: JL100_011000
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Entry
JL100_011000 CDS
T07652
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00730
Thiamine metabolism
smuc01100
Metabolic pathways
smuc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JL100_011000 (thiC)
Enzymes [BR:
smuc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
JL100_011000 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
UEM23236
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Position
SKMUc:2429714..2431519
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AA seq
601 aa
AA seq
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MPKDNNPTFTVSTGPLPASRKVHVQGTLYPDLRVALREVDLEPASGEPPVRVYDSSGPYS
DPAAEIDIARGLPALRAGWIAVRGDTEAYDGRPIRPEDNGLRQGQRSNLEEFSGPARRPL
RARAGAAVTQMAYARRGLVTPEMEYVAIRENLGRQAALEAVRDGRSFGAAIPDHVTPEFV
RDEVAKGRAIIPANINHPEIEPMIIGRNFLVKINANIGNSAVASSVAEEVEKMVWATRWG
ADTVMDLSTGANIHTTREWIIRNAAVPIGTVPIYQALEKVGGRAEELTWDIYRDTLIEQA
EQGVDYFTIHAGVRLAHIPLTARRVTGIVSRGGSILAKWCLAHHRENFLYTRFDEICEIM
RAYDISFSLGDGLRPGSIADANDAAQFAELETLGELTQVAWKHDVQVMVEGPGHVPMHKI
KENMDRQLDVCREAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLG
LPDRDDVKVGVVTYKIAAHAADLAKGHPAARLRDDALSRARFDFRWRDQFHLSLDPETAE
RFHDQTLPAEGAKTAHFCSMCGPKFCSMKITQEVREYAATGMAGMSESFRAGGAEIYRPV
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagacaacaatcccaccttcaccgtttccaccgggccgctgcccgcgtcgcgc
aaggtccatgttcagggcacgctgtacccggacctgcgggtggcgctccgcgaggttgac
ctggagcccgcgagcggcgagccgccggtccgggtctatgacagctcaggcccttacagc
gacccggccgctgaaatcgacatcgcccgcggcctgcccgcgctgcgcgccggctggatc
gcggtccgcggcgataccgaagcctatgacggccggccgatcaggccggaggacaacgga
ctgcgccagggccagcgcagcaaccttgaggagttctccggccccgcccgcaggccgctg
cgggcacgggccggtgccgccgtgacccagatggcctacgcgcggcgcggcctcgtcacg
ccggaaatggagtatgtggcgatccgcgagaacctcggccggcaggcggcgctcgaagcg
gtgcgcgacggccggtccttcggcgccgcgatcccggaccatgtcactcccgagttcgtg
cgcgacgaggtggcgaaaggcagggcgatcatcccggccaacatcaaccacccggagatc
gagccgatgatcatcggccgcaatttcctggtcaagatcaacgccaatatcggcaattcc
gccgtcgcctcctccgtggcggaggaagtcgagaagatggtctgggcgacccgctggggg
gccgacaccgtgatggacctctcgaccggcgccaatatccacaccacccgcgagtggatc
atccgcaatgccgccgtgccgatcggcaccgtcccgatctaccaggccctggaaaaggtc
ggcggccgggccgaggagctgacctgggacatctaccgcgacaccttgatcgagcaggcg
gagcagggcgtcgactacttcaccatccatgccggcgtccggctcgcccatatccccctg
accgcgcggcgggtgaccggcatcgtgtcgcgcggcggctcgatcctcgccaaatggtgc
ctggcgcaccatcgggagaacttcctctacacccggttcgatgagatctgcgagatcatg
cgggcctacgacataagcttctcgctgggcgacgggctgcgtccgggctccatcgccgat
gccaacgacgcggcgcagttcgccgagctggagacgctgggggaattgacgcaggtcgcc
tggaagcatgacgtgcaggtcatggtcgagggtccgggccacgtgccgatgcacaagatc
aaggagaacatggaccggcagctcgacgtctgccgcgaggcgcccttctacacgctcggc
ccgctgaccaccgacatagcgcccggttacgaccacatcaccagcggcatcggcgccgcc
atgatcggctggttcggcacggcgatgctgtgctacgtgacgccgaaggagcatctgggc
ctgcccgaccgcgacgacgtcaaggtaggtgtcgtcacctacaagatcgcggcccacgcc
gccgacctcgccaaggggcatccggcggcccggctgagggacgacgccctcagccgcgcc
cggttcgacttccgctggcgcgaccagttccacctgtcgctcgatcccgagacggcggag
cggttccacgaccagaccctgccggcggaaggcgccaagacggcgcatttctgctcgatg
tgcggcccgaaattctgctccatgaagatcacgcaggaggtgagggagtacgccgccacc
ggcatggccgggatgtcggagagcttccgggccggtggcgcggagatctaccgcccggtc
gagtga
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