Skermanella mucosa: JL100_011185
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Entry
JL100_011185 CDS
T07652
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smuc03019
]
JL100_011185
03009 Ribosome biogenesis [BR:
smuc03009
]
JL100_011185
Messenger RNA biogenesis [BR:
smuc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JL100_011185
Ribosome biogenesis [BR:
smuc03009
]
Prokaryotic type
rRNA processing factors
JL100_011185
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
DUF1314
Motif
Other DBs
NCBI-ProteinID:
UEM23265
LinkDB
All DBs
Position
SKMUc:complement(2467801..2468985)
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AA seq
394 aa
AA seq
DB search
MTGPSRDIEILIDRAGPLLRAAVVEDGRLTDLHIDSAVRPSRLGEIVLGRVDRIVTALNG
AFVDIGGTAGLLNNADLRTAAPTSRKAARAGTTLRAGQPVLVQVKAEPGGGKGPSLTMDV
TLPGRFLVMTPFKPGISISRRLAQGDARGRLSQMISEITGGLGGGWIVRGSALGVETELL
ASEAEALALAWRQIERQVAGDPPRTLSTGSSAAVRAVVETGGRRIARIYVSDAAIRGELA
DLAPDAAALVEIRQEALFDRYDIEGAIRELSGRTVPLPGGGSLVIDRTEALTVIDVNGGE
RPNALATNLDAVEEIARQLRLRNIGGIVIVDFINMTARRDVEHLLGALGQATADDPAGVN
VYGMSKLGLVELTRQRRGPPLSDLLASCGVSRSD
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggcccgtcccgggacatcgagatcctgatcgatcgtgccggacctctcctgcgc
gccgcggtggtcgaggacggacggttgaccgatctccatatcgacagcgccgtccggcca
agccgactgggagaaatcgtgctggggcgggtggaccggatcgtcaccgccctgaacggc
gccttcgtggatatcggcggtactgccggcctgctgaacaatgccgatctgcgcacggca
gcccccacgagccgcaaggcggcgcgcgccggaaccacccttcgggccggccagccggta
ctggtccaggtcaaggcggagcccggcggcggcaaggggccatccctgaccatggacgtg
accctgcccggccggttcctggtgatgaccccgttcaagccgggcatctccatctcccgc
cggctggcgcagggcgacgcgcggggccggctttcccagatgatctccgagatcaccggc
ggcctgggcggtggctggatcgtccgcggcagcgccctcggcgtggaaactgaattgttg
gcgtcggaagccgaagccctggccttggcctggaggcagatcgagcggcaggttgccggg
gatccgccccggaccctgagtacgggttcctcggccgcggtgcgcgccgtcgtcgagacc
ggcggccggcgcatcgctcgcatctacgtgtccgatgccgccatcaggggcgaactggcg
gacttggctcccgacgccgcagcgctggtagagatccggcaggaagccctgtttgatcgt
tacgatatcgaaggcgcgatccgggagctttccggccgcacggtcccgctccccggcgga
ggcagcctggtgatcgaccggacggaggcgctgaccgtgatcgacgtcaatggcggagaa
cgcccgaacgccctggcgaccaatctcgacgcggtggaagagatcgcccggcaactccgc
ctgcgcaatataggcggcatcgtcatcgtggatttcatcaacatgactgcccgtcgggat
gtcgagcacctgctcggcgcactgggccaagccaccgccgacgaccccgccggcgtcaac
gtgtacggcatgtcgaagctcggtctcgtcgaactgactcgccagcggcgcggcccgccg
ctgtccgatctgctggcttcctgtggagtcagtcgatcggactga
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