Skermanella mucosa: JL100_011410
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Entry
JL100_011410 CDS
T07652
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00500
Starch and sucrose metabolism
smuc01100
Metabolic pathways
smuc01110
Biosynthesis of secondary metabolites
Module
smuc_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
JL100_011410 (glgX)
Enzymes [BR:
smuc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
JL100_011410 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
UEM24036
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All DBs
Position
SKMUc:2505381..2507738
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AA seq
785 aa
AA seq
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MPPVVNVVRRSRIQEGLPFPLGATWDGLGVNFALFSAHATKVELCLFDRDGKRELERIEL
PEYTDEVWHGYLPDARPGTVYGYRVHGPFEPTAGHRFNPNKLLLDPYAKALVGHMRWSDA
HFGYRIGSPRDDLSFDRRDSAPGMPKCRVVDPAFTWGHTQAPRIPWERTIFYETHVGGYT
MRHPAVPPQLQGTYAGLAHQDVVDYIRSIGITSIELLPVHAFLDDRHLLERGLRNYWGYN
TIGFFAPEPRYSASGTIGEFKEMVARFHDAGIEVILDVVYNHTAEGNERGPTLSFKGIDN
ASYYRLAPDPRYYINDTGTGNTLNVSHPRVLQMVTDSLRYWATEMRVDGFRFDLATILGR
EPHGFDQGGGFLDACRQDPILSRVKLIAEPWDIGPGGYQVGEFPPGWAEWNDRYRDTIRS
YWKGDEAKLPEVASRLTGSSDFFEKRGRRPWASVNFITAHDGFTLNDLVSYNEKHNEDNG
ENNNDGHSNNHSWNHGVEGPTDDPEIKTLRERQKRNMLATLLFSQGTPMILAGDEFGNTQ
GGNNNVYCQNSEIGWINWDKIDEDDQALIEFVREVVALRQSHPLLGLPKFLHGHQDKELG
FKDITWITPAGVEKSSEQWQDPMARCVGMLLDGRVARGLQQQAKGKPGDILMLVINSYHE
DLPFKMPSVPGVVGWQSLLDTASPGKKPSLLDTDGQITAAGRSLVLLTALHDGAVWTSAE
STRERLSMPEFDPVPEPMEDDVPLDAPTAAELAAVDPADHGRPAEEASPEEAEAQQSEPS
ETPAK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctgttgtcaatgtcgtccgccggtcccgtatccaggaaggtctcccttttccc
ctgggcgcgacctgggacgggttgggagtgaatttcgcgcttttctccgctcacgccacg
aaggtagagctttgcctttttgacagggacggcaagagggagctggagcgtatcgagctg
ccggagtacaccgacgaagtctggcacggctatcttcccgacgccagaccgggcaccgtg
tacggctaccgcgtccacggccccttcgaaccgaccgcgggccaccgcttcaacccgaac
aaacttctgcttgacccctatgccaaggcgctggtcggccatatgcgctggtccgacgcc
catttcggataccgcatcggctcgccgcgcgacgacctgtcgttcgaccggcgcgacagc
gcgccgggcatgcccaagtgccgcgtcgtcgatccggccttcacctggggccatacccag
gcgccgcggattccctgggaacggacgatcttctacgagacccatgtgggcggctacacg
atgcgccaccccgcggtgccgccccagctccaggggacctatgccgggctggcccaccag
gacgtggtcgattacatccgcagcatcggcatcacctcgatcgagctcctgccggtccac
gctttcctggacgaccggcacctgcttgagcgcggcctgcggaattactggggctataat
acgatcggcttcttcgcgccggagcctcgctattcggcctccgggacgatcggcgagttc
aaggagatggtcgcccgtttccacgacgcgggcatcgaggtgatcctggacgtcgtctac
aaccacaccgccgagggtaacgagcgcggcccgactctgtccttcaagggcatcgacaac
gcctcctactatcgcctggcgcccgatccgcggtactacatcaacgataccggcaccggc
aacacgctgaacgtgtcccatccgcgggtgctgcagatggtgaccgacagtctccgctac
tgggcgaccgaaatgcgggtggacgggttccgtttcgacctggcgaccatcctgggacgc
gagccgcacggcttcgaccagggcggcggattcctggatgcctgccgccaggaccccatc
ctgtcccgcgtcaagctgatcgccgagccgtgggacatcggccccggcggctatcaggtc
ggcgagttcccgccgggctgggcggagtggaacgaccgttaccgcgacaccatccgcagc
tattggaagggtgacgaggccaagctgccggaagtggcatcccgtctgaccggctccagc
gacttcttcgagaagcgcggccgccgtccctgggcgagcgtgaacttcatcaccgcccac
gacggcttcaccctgaacgacctcgtctcgtacaatgagaagcacaacgaggacaacggc
gagaacaacaacgacggccattccaacaatcatagctggaaccatggcgtcgagggaccg
acggacgatcccgagatcaagacgctccgcgagcggcagaagcgcaacatgctggccacg
ctgctgttctcgcagggaacgccgatgatcctggccggcgacgagttcggcaatacccag
ggcggaaacaacaacgtctactgccagaacagcgagatcggctggatcaactgggacaag
atcgatgaagacgatcaggccctgatcgagttcgtccgcgaggtggtggcgctccgccag
tcccatccgctgctgggtctgccgaagttcctgcacgggcaccaggacaaggaactgggg
ttcaaggacatcacctggatcacccccgctggcgtcgagaagagctcggaacagtggcag
gatccgatggcgcgctgcgtcggcatgctgctcgacggacgggtcgcccgcgggctccag
caacaggccaagggcaagccgggcgatatcctgatgctggtgatcaactcctaccacgag
gatctgccgttcaagatgccttccgtgccgggagtggtcggctggcagtcccttctcgac
acggccagtccgggcaagaagccgtccctgctcgacaccgacggccagatcacggcggcc
gggcgcagtctggtgctgctgacggcgctccatgacggtgcggtctggaccagcgccgag
tccacccgcgagcggctgtccatgcccgagttcgacccggttcccgagccgatggaggac
gatgttcccctcgacgcgccgactgcggccgaattggcggcggtcgatcccgccgaccac
ggacgtccggccgaggaggcttcgccggaggaggccgaggcgcagcaatccgaacccagc
gagacaccggcaaaatga
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