Skermanella mucosa: JL100_011570
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Entry
JL100_011570 CDS
T07652
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smuc01011
]
JL100_011570
Enzymes [BR:
smuc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
JL100_011570
Peptidoglycan biosynthesis and degradation proteins [BR:
smuc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
JL100_011570
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Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
UEM23335
LinkDB
All DBs
Position
SKMUc:complement(2542514..2544472)
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AA seq
652 aa
AA seq
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MVIALVLALSVAAGAWMPGASAAELDERDLTLYRTAFRAAESGRWDEAMALASQAEEPLP
AKAIQWLDMARPGTAASFESIAAFVRGNPEWPNLNTLRRNAEMAMPLWMPSADVKAWFEA
YPPLTGGGTLRYATVLLNDGKTAQAAELVRERWVAGGFGQTEEQDFRSRFGNLLRPRDHL
ARFDRLMWDNEESAARRMLPLVGSGHQALAEARFHLAGMKRGNVDALINNVPPSLRNDPG
LLYERARWRRRKDLDAGALEILMDKPAELGRPAAWWTEMHILARRSIERGAYAEAYRIAS
NHGQRDGLPMAEAEFLSGWLALRFLNRPQQALKHFERLYAGVSAPISRSRGAYWAGRAAE
SLKQADEARRWYGLAAQHVMTFYGQLAQQRLQAPAAGALPAEARPSADAVAAFGRRELPR
LARMLNRIDPVADREGIFVRRMGSNAKTAEEYALVAGLAREIGRADLAVAVAKQAVQDDV
TLSDAGYPVVDMPQLGWLEPALVHSLIRQESTFNQNAVSPAGARGLMQLMPATARQVANQ
LGMEHTNGRLTADPEYNIALGSAYMRELLDRFNGSYILAIAGYNAGPGRVREWLQANGDP
RAEGVDVIDWIELIPIYETRNYVQRVMEALHVYRARMNGGTARLLLEEDLRR
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggtaatcgccctggtgctggccctgtccgtcgcggccggtgcctggatgccaggcgcg
tcggccgccgaattggacgaacgcgacctgacactctaccgcaccgcgttcagggcggcg
gagagcggccgctgggacgaagcaatggccctggcttcccaggccgaggaaccgctgccg
gccaaggccatccagtggctcgacatggcgcgccccggcaccgccgcgagcttcgagtcc
atcgccgccttcgtccgcggcaacccggaatggccgaacctgaacaccctgcgccggaac
gcggaaatggcaatgccgctctggatgccgtccgccgacgtgaaggcctggttcgaggcc
tatcctccgctgaccggcggcggcaccttgcgctatgccacggtgctgctgaatgacggc
aagaccgcgcaggccgccgaactggttcgtgagcgctgggtcgccggcggcttcggccag
acggaggagcaggatttccgctcgcgtttcggcaacctgctgcgcccccgagaccatctg
gcccggttcgaccggctgatgtgggacaacgaagagtcggccgcccgccgcatgctcccc
ctggtcggcagcgggcaccaggcgctcgcggaagcgcggttccatctggcaggcatgaag
cggggcaatgtcgacgccttgatcaacaatgtgccgcccagtctgcgcaacgacccgggg
ctgctctacgagcgcgcacgctggcgccgacggaaggacctcgatgccggcgcgctggag
atcctgatggacaagccggccgaactgggccgtccggcggcgtggtggaccgagatgcat
atcctggcccggcgctcgatcgagcgcggcgcctatgcggaggcctaccgtatcgcctcc
aatcacgggcagcgggacggcttgccgatggccgaagccgagttcctgtccgggtggctg
gcgctccgcttcctgaacaggccgcagcaggcgctgaagcatttcgagcggctgtacgcc
ggtgtcagcgcgccgatcagccggtcccggggagcctactgggcgggacgcgccgccgag
tccctgaagcaggcggacgaggcgcgcaggtggtacggcttggctgcccagcatgtcatg
accttctatggacagcttgcccagcagcgcctgcaagcaccagccgccggcgccctgccc
gccgaagcacggccatcggccgatgcggtcgcggcgttcggacggcgggagttgccgagg
ctggcccggatgctgaaccgcatcgacccggtggccgaccgggaggggatcttcgtccgc
cggatggggtcgaacgccaagactgccgaggagtacgccctggtcgccgggctggcgcgg
gagatcggccgggccgacctggcggtcgccgtcgccaagcaggcggtgcaggacgacgtc
acgctgtccgatgccggttatcccgtggtcgacatgccgcagctcggctggctggagccc
gcgctggtccattccctgatccggcaggagagcaccttcaaccagaatgccgtcagcccg
gcaggcgcccggggcctgatgcagctgatgccggcgaccgccaggcaggtcgcgaaccag
ttgggcatggagcacaccaacggccggctgacggccgacccggagtacaatatcgcgttg
ggcagcgcctacatgagggaattgctggaccgcttcaacggatcctacatccttgccata
gcgggctacaacgccggtcctggacgggtgcgcgagtggcttcaggccaacggggacccg
cgggccgaaggggtggacgtgatcgactggatcgagttgattccgatctacgagacgcgc
aactatgtccagcgggtgatggaggctctccacgtctatcgcgcccgcatgaacggcggt
acggcgaggctgctgctggaggaggatctgagacggtga
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