Skermanella mucosa: JL100_012090
Help
Entry
JL100_012090 CDS
T07652
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smuc01011
]
JL100_012090
Enzymes [BR:
smuc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
JL100_012090
Peptidoglycan biosynthesis and degradation proteins [BR:
smuc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
JL100_012090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
UEM23432
LinkDB
All DBs
Position
SKMUc:2653008..2653979
Genome browser
AA seq
323 aa
AA seq
DB search
MAGKAVASNLLNALLVAAAIIALSGCSTQTPSSKVAGQGGVRSAMGGYKIGEPYQIKGVW
YYPKEDFGYDETGIASWYGPGFHAETTANGERFDQNELTGAHKTLPMPSLVRVTNLENGR
SIIVRINDRGPFVPGRIVDLSRRGAQLLGFEAQGSAKVRVTVLPDESRAVAAAARAGQAG
VDVAQVSPDGAPVPVAAPRGAVQVEGAQVPIQVAERRAFDPAQTLPGATVDGRFMPAPVV
AELPVRSSGRIYVQAGAFTVYENANRLRARLSGLGVSRIDPAMVGDTQYFRVRVGPLPTI
EAADQVLGQVIEAGSNGARVIVD
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaaagctgtggccagcaatctgttgaatgctctgctggtggccgccgccatc
atcgccctgtcgggatgctccacccagaccccatcgtccaaggtggccggccagggtggc
gtccggtccgccatgggcggctacaagatcggggagccataccagatcaagggggtctgg
tactatcccaaggaggatttcggctacgacgagaccgggatagcgtcgtggtacggacca
ggattccacgccgaaacgacggcgaacggcgaacggttcgaccagaacgaactgaccggc
gcgcacaagacgctgccgatgccgagcctcgtgcgggtgacgaacctggagaacggccgg
tccatcatcgtccggatcaacgaccgaggcccgttcgtgcccggccgaatcgtcgacctg
tcccgccgcggcgcccaactgctcgggttcgaagctcaggggagcgcgaaggtccgcgtc
acggtcctgccggacgaaagcagggcggtcgccgccgccgcgcgggcagggcaggccgga
gtcgacgtggcgcaagtatcgcccgacggagccccggtaccggtcgcggcgccgcggggt
gccgtgcaggtcgaaggagcccaggtcccgatacaggtcgcggaacggcgtgcgttcgat
ccggcgcagacccttccgggtgccacggtggacggccggttcatgccggctccggtcgtc
gccgagcttccggtgcgctcttccggcaggatctacgtgcaggccggggccttcacggtg
tatgaaaacgccaacaggctgcgggcgcggctgtcgggcctgggggtttcccggatcgac
ccggccatggtcggcgatacccagtatttccgggtccgtgtcggtcctcttccgaccatt
gaggcggcggaccaggtcctgggccaagtgatcgaggccggcagcaacggcgcacgggtc
atcgtcgattga
DBGET
integrated database retrieval system
