Skermanella mucosa: JL100_012260
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Entry
JL100_012260 CDS
T07652
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00010
Glycolysis / Gluconeogenesis
smuc00020
Citrate cycle (TCA cycle)
smuc00260
Glycine, serine and threonine metabolism
smuc00280
Valine, leucine and isoleucine degradation
smuc00310
Lysine degradation
smuc00380
Tryptophan metabolism
smuc00620
Pyruvate metabolism
smuc00630
Glyoxylate and dicarboxylate metabolism
smuc00640
Propanoate metabolism
smuc00670
One carbon pool by folate
smuc00785
Lipoic acid metabolism
smuc01100
Metabolic pathways
smuc01110
Biosynthesis of secondary metabolites
smuc01120
Microbial metabolism in diverse environments
smuc01200
Carbon metabolism
smuc01210
2-Oxocarboxylic acid metabolism
smuc01240
Biosynthesis of cofactors
Module
smuc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
smuc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
smuc_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
smuc_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
JL100_012260 (lpdA)
00020 Citrate cycle (TCA cycle)
JL100_012260 (lpdA)
00620 Pyruvate metabolism
JL100_012260 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
JL100_012260 (lpdA)
00640 Propanoate metabolism
JL100_012260 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JL100_012260 (lpdA)
00280 Valine, leucine and isoleucine degradation
JL100_012260 (lpdA)
00310 Lysine degradation
JL100_012260 (lpdA)
00380 Tryptophan metabolism
JL100_012260 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JL100_012260 (lpdA)
00670 One carbon pool by folate
JL100_012260 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smuc04147
]
JL100_012260 (lpdA)
Enzymes [BR:
smuc01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
JL100_012260 (lpdA)
Exosome [BR:
smuc04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
JL100_012260 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
DAO
FAD_oxidored
FAD_binding_2
NAD_binding_8
HI0933_like
AlaDh_PNT_C
2-Hacid_dh_C
Lys_Orn_oxgnase
FAD_binding_3
NAD_binding_7
3HCDH_N
Thi4
SUFBD_core
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
UEM23465
LinkDB
All DBs
Position
SKMUc:complement(2687567..2688970)
Genome browser
AA seq
467 aa
AA seq
DB search
MADTQFDLIVIGGGPGGYVAAIRAAQLGMKTAVVEREHLGGICLNWGCIPTKALLRSAEV
SHLLHHLDEYGFSAKEVSFDLQKVVKRSRGVASQLSGGVKHLLKKNKVTVIDGHATLLGK
GRIKVEKDGTTTVGEFQAKHIIIATGARAREFPNMKADGKLVWTYRHAMVPDAMPKSILV
IGSGAIGIEFASFYLNMGAKVTVAEMVDRILPAEDEEISAMARKSFEKQGMKIYTGAKVG
EFQKGADSVTTTIEAKGKTETITVDRVILAVGIVGNVENIGLENTKVKTEKSHILVNEWL
ETDEPGLYAIGDVVGAPWLAHKASHEGVICVEHIAGIKEAHPIDVRNIPGCTYSHPQVAS
VGLSEAKAKEAGYEVKVGRFPFIGNGKAIALGEPEGMVKTVFDAKTGELLGAHMIGAEVT
ELIQGYGIAKTMETTEAELMHTIFPHPTLSEMMHESVLAAYGRAIHY
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatactcaattcgacctcatcgtcatcggcggcggacccggcggctacgtcgcc
gcgatccgggcggcacagctcggcatgaagaccgccgtcgtggaacgcgagcacctgggc
ggcatctgcctgaactggggctgcatcccgaccaaggcactgctgcgttctgccgaggtg
tcgcacctgctgcaccacctggacgaatacggcttctccgccaaggaggtcagcttcgac
ctccagaaagtggtcaagcggtcgcgcggcgtcgcctcccagctctccggcggcgtcaag
cacctgttgaagaagaacaaggtcaccgtcatcgacggccatgccaccctgctcggcaag
ggcaggatcaaggtcgagaaggacggcaccaccaccgtcggcgagttccaggccaagcac
atcatcatcgcgaccggcgcccgcgcccgcgagttcccgaacatgaaggccgacggcaag
ctggtctggacctatcgccacgcgatggttcccgacgccatgcccaagtcgatcctggtg
atcggctccggagcaatcggcatcgagttcgccagcttctacctgaacatgggcgccaag
gtgaccgtggccgagatggtcgaccgcatcctccccgcggaggacgaggagatcagcgcc
atggcccgaaagtcgttcgagaagcagggcatgaagatctacaccggcgccaaggtcggt
gagttccagaagggcgccgacagcgtcaccaccaccatcgaggccaaggggaagaccgag
accatcacggtggaccgggtcatcctcgcggtcgggatcgtcggcaacgtcgagaacatc
ggcctcgagaacaccaaggtgaagaccgagaagtcgcacatcctggtgaacgagtggctg
gagaccgacgaacccggcctttacgccatcggcgacgtggtcggcgcgccctggctggcc
cacaaggcaagccacgagggcgtgatctgcgtcgagcacatcgccgggatcaaggaagcc
cacccgatcgacgtccgcaacatcccgggctgcacctactcgcacccgcaggtggccagc
gtcggcctcagcgaggcgaaggcgaaggaggcgggctacgaggtcaaggtcggccgcttc
ccgttcatcggcaacggcaaggcgatcgcgctcggcgagcccgagggcatggtcaagacg
gtgttcgacgccaagaccggcgagttgctgggcgcccacatgatcggcgccgaggtgacc
gagctgatccagggttatggcatcgccaagaccatggagacgaccgaagccgaactgatg
cacaccatcttcccgcacccgacgctgtcggagatgatgcatgagtcggtcctcgccgcc
tacggtagggcgatccactactga
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