Skermanella mucosa: JL100_012375
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Entry
JL100_012375 CDS
T07652
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smuc03032
]
JL100_012375 (gyrA)
03400 DNA repair and recombination proteins [BR:
smuc03400
]
JL100_012375 (gyrA)
Enzymes [BR:
smuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JL100_012375 (gyrA)
DNA replication proteins [BR:
smuc03032
]
Prokaryotic type
DNA Topoisomerases
JL100_012375 (gyrA)
DNA repair and recombination proteins [BR:
smuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JL100_012375 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UEM23487
LinkDB
All DBs
Position
SKMUc:complement(2710167..2712908)
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AA seq
913 aa
AA seq
DB search
MTANLTPPPSDISPVTIEEEMRRSYLDYAMSVIVSRALPDVRDGLKPVHRRILFAMKEGG
YDSNKPYKKSARIVGDVMGKYHPHGDSAIYDAMVRMAQDFSMRLPLIDGQGNFGSMDGDP
PAAMRYTEARLAKAAESLLDDIDKDTVDFHPNYDESSAEPDVLPARFPNLLVNGAGGIAV
GMATNIPPHNLGEVIDACCAYIDDNDITIEDLMEHVPGPDFPTGAQVMGKTGIRQAYHTG
RGSIVMRGKTEIEEIRKDRWAIVINEVPYQVNKARMMERIAEVVHDKTIEGISDLRDESD
RDGVRVVIELKRDAVADVVLNQLYRYTPLQTSFGVNALALNGGRPLTMTLKDIISAFVAF
REQVITRRTEFELGKAREKAHTLVGLAVAVANLDEMIALIRRAPDAGVAREEMMARDWPA
GDVTPLIALIDEPGRGVSPQGTYRLSEAQARAILELRLNRLTGLERDKIGGDLREVTDRI
AYYLEVLASRTLLLEILRTELLEMKERFGTPRRTTLMELEFESDIEDLIQREDMVVTVSH
SGYIKRVPVSTYRAQRRGGKGRSGMSMKAEDTVHDLFVANTHTPMLFFSSRGMVYKLKVW
RLPLGTPQARGKALINLLPLVDGETISTVMPMPEDEATWGDLCVFFATSKGNVRRNKLSD
FTNIRANGLIAMKLEEEGERLIAVRTGTVDQDVLLATRGGKCIRFQVDDIRIFSGRTSTG
VRGIRLADGDEVIGMSMLNHVDADADERAAYLRQANAERRAAGEEASSDEAPDPDAEVST
NIALSPERYEAMRRKEEFILTVSERGFGKRTSSYEYRVTGRGGQGIWNIEMNERNGPVVA
AFPVTDDHQVMLVTDGGQMIRMPIHDVRIAGRKTQGVTLFRVAQGERVVSVAWLTEEAEA
ETAVSGGDDASPE
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgccaatctcacacctccgccttccgatatttcgccggtcaccatcgaagaggag
atgcggcgcagctatctcgactacgccatgagcgtgatcgtcagccgcgcccttcccgac
gtgcgcgacggcctgaaaccggtgcatcgccgaatcctgttcgcgatgaaggaaggcggt
tacgacagcaacaagccttacaagaagtccgcccgtatcgtcggcgacgtgatgggtaag
taccacccgcacggcgacagcgcgatctatgacgccatggtccgcatggcccaggatttc
tcgatgcgcctgccgctgatcgacgggcagggcaatttcggttcgatggacggcgacccg
cccgcggccatgcgctataccgaggcgcggctagcgaaggcggcggaaagcctgctcgac
gacatcgacaaggacaccgtcgacttccaccccaactacgacgaatcgtcggcggagccg
gacgtccttcccgcgcgttttccgaacctgctggtcaacggcgccggcggcatcgcggtc
ggcatggcgaccaacatccctccccacaatctgggggaagtgatagacgcctgctgtgcc
tatatcgacgacaacgacatcaccatcgaagacctgatggagcatgtgccgggcccggat
ttcccgaccggcgcccaggtgatgggcaagaccggcatccggcaggcctaccataccggc
cgcggctcgattgtgatgcgcggcaagaccgagatcgaggagatccggaaggaccgctgg
gccatcgtgatcaacgaggtgccctaccaggtcaacaaggcccgcatgatggagcggatc
gccgaggtcgtccacgacaagacgatcgaggggatctccgacctgcgcgacgaatcggac
cgtgacggcgtccgggtcgtgatcgagctgaagcgcgacgccgtcgccgacgtggttttg
aaccagctctaccgctatacgccgctgcagacctcgttcggcgtcaacgcgctggcgctc
aacggcggccggccgctgacgatgaccttgaaggacatcatctccgccttcgtcgccttt
cgcgagcaggtcattacccgccggaccgagttcgagctgggcaaggcgcgggagaaggcg
cataccctggtcggcttggcggtcgcagtcgccaacctggacgagatgatcgcgctgatc
cgccgggcgcccgatgccggcgtcgcgcgcgaggagatgatggcccgcgattggccggcc
ggcgacgtcaccccgttgatcgccctgatcgacgagccgggcaggggcgtcagcccgcaa
gggacctaccgcctgtccgaggcccaggcccgcgccatcctggaactgcggttgaaccgc
ctgaccggcctggagcgtgacaagatcggcggcgacctgcgcgaggtcacggaccggatc
gcgtactatctcgaagtcctggcgtctcgcaccctgctgctggagatcctgcggaccgag
ctgctggaaatgaaggagcggttcggcactccgcggcgaaccaccctgatggagctggag
ttcgagtccgacatcgaggacctgatccagcgcgaggacatggtcgtcacggtcagtcac
tccggctacatcaagcgggtcccggtctccacgtaccgggcgcagaggcgcggcggcaag
ggccgctcgggcatgagcatgaaggcggaggatacggtccacgacctgttcgtcgccaat
acccacacgcccatgctgttcttctcgtcgcgcggcatggtctacaagctgaaggtctgg
cgcctgccgctcggcacgccgcaggcacgcggcaaggcgctgatcaacctgctgccgctg
gtcgacggcgagacgatctccaccgtcatgcccatgccggaggacgaggcgacctggggc
gacctgtgcgtcttcttcgccaccagcaagggcaacgtccgccgcaacaagctgtcggac
ttcaccaacatccgggccaacggcctgatcgccatgaagctggaagaggaaggcgagcgg
ctgatcgcggtgcggaccggcacggtcgaccaggacgttctgctggcgacgcgcggcggc
aagtgcatccgcttccaggtcgacgacatccggatcttcagcggccgcacctccacgggc
gtccgcggcatccggctggccgacggcgacgaggtgatcggcatgtcgatgctgaaccat
gtcgacgccgacgccgacgaacgcgccgcctacctgcgccaggccaacgccgagcgccgg
gcggccggggaagaggcgtcgagcgacgaggcgcccgatcccgacgccgaggtttcgacc
aatatcgccctgtcgcccgagcgctatgaggcgatgcggcgcaaggaggagttcatcctg
accgtctccgagcgcggattcggcaaacggacctcctcctacgagtacagagtcaccggt
cggggcggccagggcatctggaacatcgagatgaacgagcgcaatggcccggtcgtcgcg
gctttccccgtcacggatgatcatcaagtcatgttggtgacggatggcgggcagatgatc
cgaatgccgattcacgatgtccggatcgcgggccgcaagacccagggcgtcaccctgttc
cgggtggcgcagggcgagcgggtcgtctcggtagcttggctgaccgaggaagcggaagcg
gagaccgctgttagcgggggcgacgatgcgtcgcccgagtaa
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