Skermanella mucosa: JL100_013685
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Entry
JL100_013685 CDS
T07652
Name
(GenBank) transcriptional regulator GcvA
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smuc03000
]
JL100_013685
Transcription factors [BR:
smuc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JL100_013685
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_11
HTH_20
HTH_5
hNIFK_binding
Motif
Other DBs
NCBI-ProteinID:
UEM23739
LinkDB
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Position
SKMUc:2988044..2988994
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AA seq
316 aa
AA seq
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MGRRLPPLNAIRAFEAAARHLSFTRAAEELNVTQAAISHQIKGLEDVLGVPLFRRLNRAL
VLTEAGQGYLPPLREALDQIADATAKLKAADGGGSLTISTIASFAAKWLVPRLPRFQERH
PHLDVLLSTTPQMVDFTQQDVDAAIRFGRGGWDGVRAEKLLTEDIFPVCSPALLESPKHL
RKPEDLAGFTLLHDDFLIGWTMWLQSAGVRGVDAARGPRFTDSALVLQAAVAGHGIALAR
RVLAADDLDAGRLVAPFGITLPTELAYYFVAPPRYFDRPKVAAFYDWVCGEARDYRKAED
RAGTAAALVNGAGQSL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgggccgccgcctgccaccgctgaacgccatacgcgccttcgaggccgccgcgcgccat
ctcagcttcacccgggcggcggaggagctgaacgtgacccaggccgcgatcagccaccag
atcaaggggctggaggacgtgctgggcgtgccgctgttccggcggctcaaccgggcgctg
gtgctgaccgaggccggccagggctacctgccgccgctgcgggaagcgctggaccagatc
gccgacgcgacggcgaagctcaaggccgccgacggcggcggctcgctcaccatcagcacc
atcgcctccttcgccgccaaatggctcgtcccccggctgcctcgtttccaggagcgacac
ccccacctggacgtcctgctgtccacgacgccgcagatggtcgatttcacccagcaggac
gtggatgcggcgatccggttcgggcgcggcggctgggacggggtgcgggcggagaagctt
ctgaccgaggacatcttcccggtctgctcgcccgccctgctcgaaagccccaaacacctg
cgcaagccggaagacctggccgggttcaccctgctgcacgacgatttcctgatcggctgg
accatgtggctccagtcggccggcgtgcgcggcgtggacgcggcccgcggtccccgcttc
acggattcggccctggtgcttcaggccgcggtggccggccacggcatcgccctggcgcgg
cgcgtgctggcggccgacgacctggatgccggccggctggtcgctcccttcggtatcacc
ctgccgaccgagctggcctattacttcgtggccccgccccgctacttcgaccggcccaag
gtggcggccttctatgactgggtttgcggcgaggcccgtgactacaggaaggcagaggat
cgcgcgggcacggcggccgcgcttgtcaacggcgccggccagtccctataa
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