Skermanella mucosa: JL100_014485
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Entry
JL100_014485 CDS
T07652
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
smuc03029
]
JL100_014485 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_014485 (bamA)
Mitochondrial biogenesis [BR:
smuc03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
JL100_014485 (bamA)
Transporters [BR:
smuc02000
]
Other transporters
Pores ion channels [TC:
1
]
JL100_014485 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
UEM23894
LinkDB
All DBs
Position
SKMUc:complement(3142991..3145294)
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AA seq
767 aa
AA seq
DB search
MAACVLAACTTTATSTIALAQGLPTTVAQANFSGGTISDIRVEGTQRIEPTTVRSYLVVR
PGDPFNPSRIDDSLKALFATGLFADVTLRREGNTLVVNVVENPIINRIAFEGNQRIEDAD
LEREVQLRPRVVYTRTRVQNDVQRLLEIYRRSGRFAATVEPKVIQLDQNRVDLVFEIDEG
ARTGVRRINFIGNEMFSDSRLREEIQTRESRWYRFLTTDDTYDPDRLTFDRDRLRRFYLS
RGYADFRVVSAVAELTPDRDGFFITFTVEEGERYRFGKIGLETELRDLDAESLRDRLTTE
EGDWYNAEEVETSIANLTNAVGDLQYAFVDIQPRIVRNRETRTIDVIYEIGEGPRVFVDR
IDITGNVRTLDRVIRREMLLVEGDPFNTSKLRRSERRIRDLGFFERVNISTAEGVQPDRS
VIQVDVQEQSTGEIEIGAGFSTIDGPLANFGIRERNLLGRGQDLRFAATVSGRTQEFDLS
FTEPYFLERDLAAGIDLFRITRDNQDESSYDEANTGIGFRLGYPLTERLRQRLNYTLQQT
EIENVASDASRFIREQEGSRIVSLVGQELLYDARDSRINPTEGYFVRLNNEVAGLGGDAQ
FSRNRLGAGVYFPVTEGTVLSFLGEVGFIVGIGEDVAISDRFFIGGDSLRGFAPAGIGPR
ELVSDDSLGGNRFARGSVELAFPIGLPDEFGVTGHTFTDFGTLGDVDATAQNASERLVDD
DAIRLSIGAGISWRSPLGPIRVDLAFPILKEDYDKKEQFRFSFGTRF
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
ttggcagcctgcgtgctggctgcgtgcacgacgacggctacgtcgaccatcgcactggcc
caggggctgccgaccacggtggcgcaggccaatttctccggcggtaccatttcggacatc
cgggtcgagggcacccagcgaatcgagccgacgacggtacgttcatatctggtggtccgt
cccggcgatccgttcaatccgtcacggatcgacgactcgctgaaggccttgttcgccacc
ggcctgttcgccgacgtcaccctgcgtcgcgagggcaacaccctcgtcgtcaacgtggtc
gagaacccgatcatcaaccggatcgccttcgagggtaaccagcggatcgaggacgccgac
ctggagcgcgaggtccagctccggccccgcgtcgtctatacccggacgcgggtgcagaac
gatgtccagcgcctgctggagatctatcggcgcagcgggcggttcgccgcgacggtggaa
ccgaaggtcatccagctggaccagaaccgcgtcgacctggtgttcgagatcgacgagggt
gcgcgcaccggggtgcggcggatcaacttcatcggcaacgagatgttcagcgacagccgg
ctgcgggaggagatccagacccgcgagtcgcgctggtaccggttcctgaccaccgacgac
acctacgatcccgatcgtctcaccttcgaccgcgaccggctgcggcgcttctacctgtcg
cgcggctatgccgatttccgggtggtctcggccgtagccgagctgacccccgaccgcgac
ggttttttcatcaccttcacggtcgaggagggcgagcgctaccggttcggcaagatcggg
ctggagaccgagctccgtgacctcgacgccgagagcctgcgtgaccggctgaccaccgag
gaaggcgactggtacaacgccgaggaggtcgagacctccatcgccaacctgaccaacgcg
gtcggcgacctccagtatgccttcgtggacatccagccgcggatcgtccgaaaccgcgag
acccggacgatcgacgtcatctacgaaatcggcgaaggcccgcgcgtcttcgtcgaccgg
atcgacatcaccggcaacgtccgcaccctcgatcgggtgatccggcgcgaaatgctgctg
gtcgaaggcgacccgttcaacacctcgaagctgaggcggtcggagcgccgcatccgcgac
ctgggcttcttcgagcgtgtcaacatctcgacggcggaaggcgtgcagcccgaccggtcg
gtcatccaggtcgacgtccaggaacagtcgaccggcgagatcgagatcggcgccggcttc
tcgacgatcgacggtccgctcgccaatttcggcatccgcgagcgcaacctgctcggccgt
ggccaggacctgcgtttcgcggcgaccgtctccggacggacccaggaattcgacctcagc
ttcaccgagccctacttcctggagcgcgacctggcggcgggcatcgacctgttccgcatc
acccgcgataaccaggacgaaagctcgtacgacgaggccaataccggcatcggcttcagg
ttgggttatccgctgaccgaacgcctgcgccagcggctgaactacaccctgcaacagacg
gagatcgagaacgtcgcgtccgatgcctcgcgcttcatccgcgagcaggagggaagccgt
atcgtctcgctggtcgggcaggagctgctgtacgacgcgcgggacagccggatcaacccg
acggagggttacttcgtccgcctcaacaacgaggtcgcgggcctgggcggcgacgcgcag
ttctcgcgcaaccggctgggcgccggcgtctacttcccggtgaccgaaggcacggtcctc
agcttcctgggtgaggtcgggttcatcgtcggcatcggcgaggacgtggcgatttccgac
cggttcttcatcggcggcgacagcctgcgcggcttcgctcccgccggtatcggtccgcgc
gaactggtcagcgacgacagcctcggcggcaaccgctttgcccgcggcagcgtcgagttg
gctttcccgatcggcttgccggacgagttcggcgtcaccggccataccttcaccgacttc
ggcaccctgggcgatgtcgacgcgaccgcccagaacgcgagcgaacgtctggtcgacgac
gatgcgatccggctctcgatcggcgccggcatctcctggcggtcgccgctcggcccgatc
cgcgtcgacctggccttcccgatcctgaaggaagactatgacaagaaggagcaattccgc
ttcagcttcggcaccaggttctaa
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