Skermanella mucosa: JL100_014945
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Entry
JL100_014945 CDS
T07652
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
smuc
Skermanella mucosa
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UEM18428
LinkDB
All DBs
Position
SKMUc:3241654..3248361
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AA seq
2235 aa
AA seq
DB search
MIDAKLPSALTLHVAVGFAIGELVAPSPVLAQSVGCVNSGTPVTCLTDNQSWTTIDTSGG
AGWDSDDNDDAGGTGSTGGTALITNPAGSTSAFALYAVSYGGAGGTGAPAGEDGGHFFNG
PSAGGAGGQGGTATATNDGVVSIPNISATASRAALNALVDGGAGGASGNGSGLNGGQAGG
AGGDGGTASGTNGGQITTVVDYAAGIFVHAAGGAGGAGGGAGDFSSAGNSGAGGNGGSAT
GTNNAGATISTSGSYSAALVIQADGGAGADGIGSGNLDSSGNAGSGGNGGTTQASNAGSL
TVTGDTSGGIWATAVGAAGGTGASNGNQGSAAGDGGNGGTVTAQNSGTASTAGTWSYGVG
ITSAGGAGGAGGTSDFEGETGFGGNGGNGGAGGSSTISINAGSSITATGANSFGVYADAN
GGAGGAGGTGMTTPGNSGNGGSGGTVLINAVGSVTTSGSNAAGIIAFSNGGAGGTTSSGN
GQTGGAGGAGYYAAVTFGTSQGAQASVTTSGSGSPGVAASGTGGAGGDGSLPSTFNTGKG
SGGAGGYGAGANVTTYGGTTITTSGSNSPGVSVYSSGGAGGDGADQSGVANGSDGSAGNG
GDGGTGGIVGAVSASTITTSGTNSDGLYVASFGGNGGDGGVSNEWVNADGGSGGIGGSNV
SWNYSIDPYIAAATNNGSISTSGTQSSGIDVESWGGTGGTGGGANGLVYTTGGNAGSGGT
AGDVLGVNNGTINTSGDESYGIFGVSVGGGGANGGNTSAGGLITISTGGNASGGGDGNAV
VLTNAGTILTSGDTAAGIFGESIGGGGGNGGTVASYSGSFAIPSVSVSIGGTAGNGGGAG
DITLTNNGALTTLGLNAYGMEALSVGGGGGAGGGASSTSYSAGYGDIPSISVAVAIGGTG
GTGGDGGTIAVTNGGTVATAGDQSMAIAAYSIGGGGGDGANAATQTYTFGTAPEISVGAS
VGGTGGSGGTGGAITVANTGNLFTAGFAADAVYALSVGGGGGNGGTGTAQSSTSLPFSND
LKYIPVSFGTALSANVSVGGGGGSGNTGGDIVVTNSANISTYGVDSRGVFAQSIGGGGGI
AASGNSSGATKFTVNVAVGGTGGTGGDGGTVTLTNSGGAIATAADGAHGIHAQSIGGGGG
SGGTASADSGGLQIESVLKYVGVNEAKILAQSLSKQISTLLNAVSSKYGPSLVSKLEKST
TPNWTPSISASVAIGGNGGLSGDGGVVETTNGAVIATGGDVAFGIFAQSVGGGGGNGGAA
TIAGGNVINTGVAVGGSGGASGDGNTVTVTNNGQITTAGDAAFGIAAQSGGGGGGLGALG
LNDSIFSLNAMLTLGGSSGTSGNPSGQGDTVTVTNAGSIMTSGSESHGIVAQSLGAGGGL
ALLNPGGTTSPSDDPDVQAILQDLASQVSNLSDVATAYQQALSSASGTVALNLGGSSSAS
GDGGPAIVNASGLISTSGDNAFGIVAQSLGGGGGLAADGAGLDMSLAVSGTLGGGSGDGG
NTAATLTGGSIATTGIGSVGIFAQSIGGGGGYTGAFAASGTDFQTFLSNGSVSDGVGGAV
TVTTASGTSITTTGSNAHGIFAQSLDGGGGAVGSSNGIVIPNASGNAGRAGSNASTSLPG
SITLDLSGIISATGANSVGVYAQSGTQGTSGAIISPQSSNGNISITASGTLSGGSGTGAA
IQIDGGNLNTVTIARGGAVSALSGTAIMGSLGSEAVTNNGTLSGSLLLGGGGNALGNYGT
FNAGAIVDLGGGALTNAGILNPGGAGAIAITAVNGTFAQTGGGIYAPDIDATTGAGDLLV
VSGNAAVAGTIAPVVTDPLPGKSFMVLQSTGGTVDASAAQVLSGQAVYSFSLVPAASSLS
VGLDANFLPASANLNPKQTQVAQHIQSLWSGNATDPASAALYDSLAGVTSGAALGTALNS
LSSQAGQGASAGAVTQTQQFADNMHSCPTFAESGAKLNESDCVWQRTLGHFTTQDATVDA
GGYTFRSAVAQFGGQKMVAPGWILGLSGAYTLSRSKDDTGQATSKGQGFLLGGVLKREID
DWTLSTALHAGMSWHDNSRSTSINGRPAEATSTTRVQHVGGRLRAAYQMEMDGWYLKPYA
DIDVVYSHVPGFSESGLGAHGIKTLPSDQVTVSGSPNLELGGRIDLEDMRVRSFLSVGLT
VLSDGTRTVEQRFVGSPAWTPSWRSTTTSADRLGKVTVGVDLAHVSGFDLKGEYGVRFAS
GYTSQTGSLRLSYRY
NT seq
6708 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgccaagctaccttccgcgcttaccctccatgtagcagtcggtttcgccatc
ggggaactggtcgcgccctcgccggtcctggcgcaatcggtcggttgcgtgaacagcggg
acgcccgtcacgtgccttaccgacaatcagagctggaccacgatcgacaccagcggcggc
gccggttgggacagcgacgacaacgatgatgccggcggcaccggctcgaccggtggcacg
gccctcatcaccaatcccgccggcagcacgtcggcctttgccctttatgccgtctcctac
ggcggtgcgggcggcaccggcgcccccgccggtgaggacggcgggcatttcttcaacggt
ccatccgcgggcggcgccggaggccagggcggcacggcaacggcgaccaacgacggcgtt
gtgtcgattccgaacatttccgccaccgccagtcgggccgccctgaatgcgctggtggat
ggcggtgcgggcggcgcgtcgggaaacgggtcaggcctgaacggcgggcaggccggcggt
gccggcggcgatggcggcaccgcttccgggaccaacggcggtcagattaccacggtggtc
gattatgccgccggcatctttgtccacgccgcgggtggagccggcggcgccggcggtggg
gccggtgatttctccagtgccggaaacagcggcgccggtggaaacggcggttcggcgacg
ggaacgaacaatgccggcgcgacgatatcgacatcgggcagttactccgcagctctcgtc
atacaggccgatggcggtgccggggccgacggcatcggcagcgggaatctcgactcctcc
gggaacgccggcagcggcggaaacggtggcacgacccaagcctccaacgccggatccctt
accgttaccggcgatacgtcgggcggcatttgggcgaccgcggtcggagcggcaggcggg
accggcgcctccaacggtaaccagggatcggcggccggcgacggcggcaacggcggcacc
gtgacggcgcagaattccggcaccgcttcgactgcggggacatggtcctacggggtcggc
atcacctccgccggcggggcgggcggggccggggggaccagtgacttcgaaggggagacc
ggcttcggcggcaacggcggcaatggcggggccggcggctcctccaccatcagcatcaac
gccggctcctccatcaccgccacgggcgcgaattccttcggcgtctacgccgacgccaac
ggcggggccggcggggccggcggcaccggcatgaccacccctggaaacagcggcaacggc
ggctccggcggcaccgtgctcatcaatgcggtcggcagcgtcacgacgagcggttccaat
gccgccgggatcatcgcgttcagcaatggcggggccggcggcaccaccagcagcggcaac
ggccagaccggcggcgccgggggagcgggctattacgccgcggtcaccttcggcacgtcg
cagggagcccaggcgtcggtgaccacgtccggttccggttcgcccggcgtcgccgccagc
gggaccggcggagccggcggcgacggcagcctgccctcgaccttcaacaccgggaaaggc
tccggcggtgccggcggctatggtgcgggcgccaacgtgaccacctatggcgggaccacg
atcacgaccagcggaagcaattcgcccggcgtctccgtctacagttcgggaggtgccggg
ggcgacggcgcggaccagagcggggtcgccaacggcagcgacggctcggccggcaacggc
ggcgacggcggcaccggcggcatcgtgggtgccgtttcggcatcgacgatcaccacgtcg
ggcacgaactcggacggactctacgtcgccagcttcggcggcaacggcggcgacggcgga
gtttcgaacgaatgggtgaatgccgacggcggcagcgggggcatcggcggctccaacgtt
tcctggaactatagcatcgatccctatatcgccgccgcgaccaacaacggatcgatctcc
acctccggcacccagtcttccggcatcgacgtggaaagctggggcggcaccggcggcacc
gggggcggcgcgaacggcttggtctacaccaccggcggcaatgccggaagcggcggcacc
gccggggacgtcctgggcgtcaacaacgggacgatcaacacctccggcgacgaatcctac
ggcatcttcggcgtttccgtcggcggcggcggggccaacggcggcaacaccagcgccggc
ggcctgatcaccatctcgaccggcggcaacgccagcggcggcggcgacggcaatgccgtc
gtcctgaccaatgccggcaccatcctcaccagcggcgacaccgccgccggcatcttcggg
gaaagcatcggcggcggcggcggcaacggcggcaccgtcgccagctattcaggctccttc
gccattcccagcgtctccgtctcgatcgggggcactgccggcaacggcggcggcgcgggc
gacatcaccctcaccaacaacggggcgctgaccaccctcggcctcaacgcctacggcatg
gaggcgctcagcgtcggcgggggcggcggcgccggcggcggcgcgagctcgacctcctac
agcgccggctacggcgatattccgagcatctcggtcgcggtcgccatcggcggaacgggc
ggaacgggcggcgacggcggcaccatcgccgtcaccaacggaggcacggtcgcgacggcc
ggcgatcagtccatggcgatcgccgcctacagcatcggcggcggcggcggcgacggcgcg
aacgccgccacccagacctacaccttcggcaccgcgcccgagatcagcgtcggcgccagc
gtcggcggaaccggcggcagcggcggaaccggcggcgcgatcaccgtcgccaacaccgga
aacctgttcacggccggcttcgccgccgacgcggtctatgcgctgagcgtcggcggcggc
ggcggcaacggcggcaccggcaccgcccaatcatcgaccagcctgcctttctccaacgac
ctcaaatacatcccggtatccttcggcactgccctgtcggccaacgtttcggtcggcggc
ggcggcggatcgggcaataccgggggcgacatcgtcgtcacgaactcggcgaacatcagc
acctacggcgtcgattcccgcggcgtcttcgcccagagcatcggcggcggcggcggtatc
gcggcgagtggaaacagttccggagccaccaaattcaccgtcaacgtcgcggtggggggc
accggaggtaccggtggcgacggcggcaccgtcaccctcacgaacagcggtggcgcgatc
gccacggccgcggacggcgcccacggcatccatgcccagtccatcggcggcggcggcgga
agcgggggaacggcctcggccgactccggcggcctgcagatcgaaagcgtcctgaagtat
gtcggcgtgaacgaggccaagatcctcgcccagtccctgtcgaagcagatctcgacccta
ttgaacgcggtaagttcgaaatatgggccgagcctggtcagcaagctcgaaaaatccacc
accccgaactggacgccatcgatctcggccagcgtcgcgatcggcggcaacggcggcctg
agcggcgacggcggcgtggtcgaaaccacgaacggcgcggtgatcgcgacgggcggtgac
gtagccttcgggatcttcgcacagtcggtcggcggcggcggcggcaacggcggcgcggca
acgatcgcgggcggcaacgtcatcaacaccggtgtcgccgtcggcgggtccggcggcgct
tccggcgatgggaacacggtgacggtcaccaacaacgggcagatcaccacggcgggcgat
gccgccttcggcattgccgcgcagagcggcggcggcggcggcggcctgggtgccctcggc
ctcaacgactcgatcttctcgctgaacgccatgctgaccctgggcggctccagcggcacc
tccggcaatccctccggccaaggcgacaccgtgacggtcacgaatgccggctcgatcatg
acgtccggttcggaatcgcacggcatcgtcgcgcagtcgctcggcgcgggcggcggtctg
gcgctgctcaatccgggcggcacgacctccccgtcggacgacccggatgtccaggctatt
cttcaggatctggcctcgcaggtgtccaacctgtccgacgtggcgaccgcctaccagcag
gcgttgtccagcgcctcgggcacggtcgctctcaacctcggcggttcatcctcggcgagc
ggcgacggcggtccggcgatcgtcaacgcgtccgggctgatctccacgtccggcgacaac
gccttcggcattgtcgcgcagtcgctcgggggcgggggcggcctggcggccgacggcgcg
ggactcgacatgagcctggcggtgagcgggaccctgggcggcggatccggcgacggcggc
aacaccgcggccaccctcaccggcggttcgatcgcgaccacgggcatcgggtcggtcggc
atcttcgcccagagtatcggcggcggcggcggctataccggcgccttcgcggcgagcggc
accgatttccagaccttcctgtcgaacggcagcgtgtccgacggcgtcggcggtgcggtg
accgtcacgacggcatcgggcaccagcatcacgacgaccggctccaacgcccacggcatc
ttcgcccagagcctcgacggcggcggcggcgcggtcggctcgtccaacggcatcgtcatt
ccaaacgcatcgggcaatgcggggcgagccggttcgaacgcctcgacgagccttcccggc
agcatcacgctcgatctttccggcatcatctcggcgaccggagccaactcggtgggcgtc
tacgcccagagcggcacgcaggggaccagcggcgccatcatttcaccgcagtcctcgaac
ggaaacatctcgatcaccgcttcgggcaccctgtccggcggcagcggtaccggcgcggcg
atccaaatcgacggcggcaacctcaacacggtcaccatcgccaggggaggcgcggtcagc
gcgttgtcgggcacggccatcatgggctcgctcggttccgaggcggtcaccaacaacggc
accttgtcgggcagccttttgctcggcggcggcggcaacgccctgggcaactacggaacc
ttcaatgccggcgccatcgtcgatctcgggggcggcgcgctgaccaacgccggcatcctc
aatccgggcggagccggcgccatcgccattaccgcggtgaacgggacgttcgcccagacc
ggcgggggcatctatgccccggacatcgatgccaccaccggcgccggcgacctgctggtc
gtttccgggaacgcggccgtcgccggcaccatcgccccggtcgtcaccgatccgctgccc
ggaaagtcgttcatggtgctccagagcaccgggggcacggtggacgcctcggccgcgcag
gttttatccggccaggcggtctattccttttcccttgtaccggcagccagcagcctttcg
gtcgggctcgacgccaacttcctgccggcatccgccaatctcaatcccaagcagacccag
gtcgcccagcacatccagtcgctgtggagcggcaatgccactgatccggcatcggccgcg
ctctacgacagcctggccggcgtcaccagcggcgccgcgctgggcacggcgctgaacagc
ctttccagccaagccggccagggggccagtgccggcgccgtcacccagacgcagcaattc
gcggacaacatgcacagctgcccgaccttcgcggaatccggagccaagttgaacgagagc
gactgcgtctggcaacgcaccctcggccacttcaccacgcaggacgcgaccgtcgatgcc
ggcggctacaccttccgctcggcagtcgcgcagttcggcggccagaagatggtcgcgccg
ggctggatcctgggcctctccggggcttacacgctcagccggagcaaggacgacacgggg
caggccaccagcaagggccagggttttctcctgggcggggtgctgaagcgcgagatcgac
gactggacgctgtccacggcgctgcatgccggcatgagctggcacgacaacagccggtcc
acgtccatcaacggccggccggcggaggcgacctccacgacccgcgtccagcatgtcggc
ggacgcctgagggcggcctaccagatggagatggacggctggtacctgaagccctatgcg
gatatcgacgtggtctattcccatgtacccggcttcagcgaaagcggacttggcgcacac
ggcatcaagaccctgccctcggaccaggtgaccgtttcgggctcgcccaacctggaactg
ggcggtcggatcgatctggaggacatgcgcgtccggtcgttcctgtcggtggggctgacg
gtgctgtcggacggaacgcggacggtcgagcagcgcttcgtgggctcgcccgcctggacc
ccgtcgtggcgcagcacgacgacctccgccgaccggctcggcaaggtcactgtcggagtc
gacctggcccatgtcagcggattcgacctgaagggcgagtacggagtgcgcttcgcgtcc
ggatataccagtcagaccggcagcctgcgcctttcttaccggtactga
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