Skermanella mucosa: JL100_015300
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Entry
JL100_015300 CDS
T07652
Name
(GenBank) TM0106 family RecB-like putative nuclease
Organism
smuc
Skermanella mucosa
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_H_2
AAA_12
AAA_11
AAA_30
AAA_19
Viral_helicase1
UvrD_C_2
NAT10_TcmA_helicase
PDDEXK_1
nSTAND3
AAA_16
SLFN-g3_helicase
HHH_5
NPHP3_N
DEAD
UvrD-helicase
PhoH
AAA
Motif
Other DBs
NCBI-ProteinID:
UEM18486
LinkDB
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Position
SKMUc:3312074..3315502
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AA seq
1142 aa
AA seq
DB search
MRRYRGNILLSAGDLVTFVGCRHASALDRRALDEDLERTADDATLRLLQERGIEHERAFR
DDLARRGLRVVEIPDGPDLAERVRLTLAALRSGADVVYQGALLDGGWHGFADFLIRTDEG
VAGGYGYEVADTKLARTAKPRHVIQLAVYTELLARVAGATPRLMRVRLGSGEEAVVPFLD
VAAYVRYARARLEDFLSGGTPAGTTAEPCAQCDVCHWRGTCLDAWDGADHLSLVANISRT
QIRRLSAAGIGTVAALAALPETAAVPGMTEETLRRLRSQAALQVSVRGRDDRRWEPLPAG
PGRGFGRLPAPTAHDLFFDMEGDPLYPGGLEYLFGVQAGDAATGRFQAFWGHDRAGEKQA
FEAFMDFAEDHLARHPDAFIYHYNHYEVTALKRLAMGHGSREATLDGMLRRHRFVDLYAV
VREAIRTSEPGYSLKNIERFYLGPRGGDVANAADSIVAYEEWRRGGDDSLLRRIEDYNAV
DCRSTAGLRDWLVSIRPVGLGWFDAEPDGADAAALERQRAAEAERQALEALLLGGAPDGE
LPVRRLIADLAEFHRRAQKPDWWALFDRQTRAEDELVDDAECLGALILDGRSTPVGRSLL
YTYRFPPQDTKLRAGDRPTVAATGSPAGTIESLDLRGGTVVIRRGTRQEPLPSDLCLGPP
LPVEDTVLRAAIRRFAGSVAAGDGRFAALEAIVRREPPRLAGRAPGAPVVAAGSGLLEGS
VAAIAALDGSYLVVQGPPGTGKTYTASHAILDLLRRGRRVGVSSNSHKAINNLLAAVERL
AADTGFTFRGVKKSAAGDGSALNGRLIGDVFNNAEVDDALDGGARLVAGTAWLLARPELE
GRLDTLFVDEAGQVSLANLVAMGTSAGNIVLVGDQMQLSQPVQGTHPGGSGAGVLEHLLG
GHATVPPDRGVFLDASHRMHPDVCGWVSETIYDGRLIAAPGTASQVLELGPGAHPALAPA
GVRFVAVPHAGRAQRSPEEAEVVRAVWSSLMGQRYRDRHGRAHAFGPDNVLVVAPYNVQV
NHLAEILPSGARVGTVDRFQGQEAEVVIVSMTTSSGDDLPRGVEFLFSRNRLNVALSRAR
SLAVVVASPRLLEVQCATIEQMRLVNTLCRAYEWSLGLDPAQARRRAALPDPPRGEALAA
AG
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggtaccggggaaacatcctgctctcggcaggcgatctggtgaccttcgtcggg
tgccggcatgccagcgccctcgaccgccgcgcgctcgacgaggatctcgagcgtaccgcc
gacgacgccacgctgagactgctccaggagcgcgggatcgagcatgaacgcgcgttccgc
gacgacctggcccgccggggcctgcgggtggtcgagatccctgacggccccgacctcgcg
gagcgcgtccggctgacgctcgccgccctgcgctccggcgccgacgtcgtctaccagggc
gccctgctcgacggcggctggcacggcttcgccgacttcctgatccgcacggatgagggc
gtggcgggcggctacggctacgaggtcgccgacaccaagctcgccaggaccgccaagccc
cggcacgtcatccagctcgcggtctacaccgagctgctggcgcgcgtcgcgggtgcaact
ccccggctgatgcgggttcgcctcggcagcggcgaggaggccgtggtgccgttcctggac
gtcgcggcctatgtgcgctacgcccgggcaaggctcgaggacttcctgtccggcgggacg
ccggccggcaccacggccgagccctgcgcccagtgcgacgtctgccactggcgcgggacc
tgcctggacgcgtgggacggcgccgaccatctgagcctggtcgccaacatcagccgaacc
cagatccgcaggctgtccgcggccggcatcggcaccgtggcggcactcgcggcattgccc
gaaaccgccgcggttcccggcatgacggaagagacgctgcggcggctacgctcacaggcc
gccctgcaggtttcggtgcgcgggcgggacgaccggcggtgggaaccgctgccggcaggc
cccgggcgcggcttcggccgcctgccggcgccgaccgcgcacgacctcttcttcgacatg
gagggcgacccgctgtatcccggcggcctggaatacctgttcggcgtccaggccggcgac
gccgcgaccgggcggttccaagccttctggggccacgaccgggccggcgagaagcaggcg
ttcgaggcattcatggacttcgccgaagaccacctcgcccgtcacccggacgccttcatc
taccactacaaccactacgaggtgacggcgctgaagcgcctcgcgatgggccacggcagc
cgcgaggcgacgctcgacgggatgctgcgccggcaccgcttcgtcgacctctacgcggtg
gtgcgcgaggcgatccgcacctcggagccgggatactcgctcaagaacatcgagcgcttc
tacctgggtccgcgcggcggcgacgtcgccaacgccgccgacagcatcgtggcctacgag
gagtggcggcggggtggcgacgactccctgctgaggcggatcgaggactacaacgcggtg
gactgccggtcgacggccgggctgcgcgactggctggtgtcgatccgtccggtagggctt
gggtggttcgacgcggaaccggacggtgcggacgcggcggcgctggaaaggcagcgggcg
gcggaggccgagcggcaggcgctggaagccctgctcctcggcggagcgcctgacggggag
ctgccggtccgccggctgatcgccgacctcgcggagtttcaccggcgcgcccagaagccg
gactggtgggccctgttcgaccgccagacgcgcgccgaggacgaactggtcgacgatgcc
gagtgcctgggcgcactcattctcgacggccgctctactccggtgggccgctcccttctc
tatacataccgcttcccgccgcaggacacgaagctgcgcgccggcgacaggccgacggtc
gccgccaccgggagcccggccgggacgatcgagagcctggatctccgcggcggcacggtg
gtgatccggcgcggaacccggcaggagccgctgccgtccgacctctgcctcgggccgccg
ctccccgtcgaggacacggtgctgcgcgccgcgatccggcgcttcgccggcagcgtcgcg
gccggcgacggccggttcgcggcgctggaggcgatcgtccggcgcgagccgccccggtta
gccggccgcgcgccgggagccccggtggttgccgccggttccggcctgctcgagggcagc
gtcgcagccattgcggcgctggacgggagctacctggtcgtccagggcccgcccggcacc
ggcaagacctacacggcgagccacgccatcctcgacctgctccggcgcggccggcgcgtc
ggcgtgtcctccaactcgcacaaggcgatcaacaacctgctggccgccgtcgagaggctc
gcggccgacaccggcttcaccttccgcggcgtcaagaagtccgcggccggcgacggctcc
gccctgaacggcaggctgatcggggacgtcttcaacaacgccgaggtcgatgatgccctc
gatggcggcgcccggctggtcgccggcacggcgtggctgctggcccgcccggaactcgag
ggcaggctcgacaccctgttcgtcgacgaggcgggacaggtgtcgctcgccaacctcgtg
gccatggggaccagcgcgggcaacatcgtgctggtcggcgaccagatgcagctgagccag
ccggtccagggcacccacccggggggctcgggcgccggagtcctcgagcacctgctcggc
ggccacgcgacggtgccgcccgaccgcggcgtcttcctggacgccagccaccgcatgcac
ccggatgtctgcggctgggtctcggagaccatctacgacggccggctgattgccgcaccg
ggaaccgcgtcccaggtcctcgagctcgggcccggcgcccaccctgccctggcgcccgcg
ggcgtgcgcttcgtggcggtcccgcatgcggggcgggcgcagcgctcgcccgaggaggcc
gaggtggtgcgggcggtctggtcgagcctgatggggcagcgctaccgcgaccgccacggc
cgggcccacgccttcgggccggacaacgtcctcgtggtggccccctacaacgtgcaggtc
aaccatctggcggagatcctgccgtccggcgcccgggtcggcacggtcgaccgcttccag
ggccaggaggcggaggtggtgatcgtctcgatgacgacgtcgagcggcgacgacctgccg
cgcggcgtcgagttcctgttctcgcgcaaccgcctgaacgtcgcgctgtcgcgcgcccgc
agcctcgccgtcgtcgtcgccagtccgcgcctgctggaggtccagtgcgccacgatcgag
cagatgcgcctggtgaacacgctgtgccgggcctacgaatggtcgctcggcctcgatccg
gcgcaggcgcgccggcgggcagcgcttcccgacccgccgcgtggagaggctttggccgcc
gccggctga
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