Skermanella mucosa: JL100_015570
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Entry
JL100_015570 CDS
T07652
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
smuc
Skermanella mucosa
Pathway
smuc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JL100_015570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_015570
Transporters [BR:
smuc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JL100_015570
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
MMR_HSR1
AAA_16
AAA_22
AAA_29
AAA_30
DUF87
DUF2173
Motif
Other DBs
NCBI-ProteinID:
UEM18536
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All DBs
Position
SKMUc:complement(3377526..3379361)
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AA seq
611 aa
AA seq
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MHAYFENLLDALAPADVVQPPQRPGAFVSYFLKPIGGLLAVTLVVAGLASFSELALYAFL
GWLVDWMATTGREEFLQVHGWSLAGMALVAVVIRPVLVLASRGLINLTLIPALTSRVRWR
NYRWVLRQSLTFFQNDFAGRVAQKVMQTGPALREAVVNVIDGVWFLVTFLIGAIALFAAL
DWRLLVPVLAWIAAYAAVIWVMVPPVRRKSEALSEATSALSGRVVDSYTNILSVKLFAHA
EREDEFVRSGLVRQLAAYRVVMRAIFDMTVALTVLNSLLLFAMTALAVHLWLAGAITTGS
IAVATGLIIRLTQMSGWILRTVTTLFENIGTIENGIETISRPHGVTDRPRAPDLVVGKGA
IRFDDVRFHYGKEGGVIENLSLDVRPGEKVGLVGRSGAGKSTLVNLLLRFYDLEGGRILI
DGTDISTVTQASLRAHIGVVSQDTGLLHRSIADNIRYGRPDATREDMVRAARLAEADHFI
DGLSDQRGRGGYDVLVGERGVKLSGGQRQRIAIARVILKDAPILVLDEATSALDSEVEAA
IQGQLKTLMEGKTVIAIAHRLSTIAALDRLVVMDGGRVVEEGSHRELVRRGGLYARLWER
QSGGFLGLPAE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcttactttgagaacctgctcgacgccttggcaccggcggatgtcgtccagccg
ccgcagcgtcccggcgcgttcgtcagctacttcctgaagccgatcggcggcctcctggcc
gtcaccctcgtggtggccgggctcgcgtccttctccgagctggcgctctacgctttcctg
ggctggctggtggactggatggcgacgacaggaagggaggaatttcttcaggtccacggc
tggtcgctggcgggcatggcgctggtcgcggtcgtcatccgcccggtgctggtgctcgcc
tcgcgcgggctgatcaacctgacgctgatcccggcgctgaccagccgggtgcggtggcgg
aactaccgctgggtgctgcgccagagcctgaccttcttccagaacgacttcgccgggcgg
gtcgcacagaaggtgatgcagaccgggccggcgctgcgcgaggccgtggtcaacgtgatc
gacggcgtctggttcctggtgacgttcctgatcggcgccatagccctgttcgccgccctg
gactggcggttgctggtcccggtgctggcctggatcgccgcctatgccgccgtcatctgg
gtcatggtgccgccggtccgccggaagtcggaagccctgtcggaggcgacctccgcgctg
tccggccgggtggtggacagctacaccaacatcctgtcggtcaagctgttcgcccatgcc
gagcgggaggacgagttcgtccggagcgggctggtgcggcaactggcggcctaccgcgtg
gtcatgcgcgcgatcttcgacatgacggttgccctgacggtgctgaacagcctgctgctg
ttcgccatgaccgcgctggcggtccatctctggctggcgggggcgatcaccaccgggtcg
atcgcggtggcgacggggctgatcatccgactgacccagatgtcgggctggatcctgcgc
actgtgacgaccttgttcgagaatatcgggaccatcgagaacggcatcgagaccatctcc
aggccccatggcgtgacggaccggccgagggcgcccgacctcgtggtgggaaagggcgcg
atccggttcgacgacgtccgcttccattatggcaaggaaggcggcgtgatcgagaacctg
tcgctcgatgtccgtccgggcgagaaggtcgggctggtcgggcggtccggcgccgggaaa
tccacgctggtcaacctgctgctgcgtttctacgacctggagggcggccgcatcctgatc
gacggcacggatatctcgaccgtgacccaggccagcctgcgggcgcatatcggcgtggtg
agccaggatacgggacttctgcaccgctcgatcgccgacaacatccgctatggccggccg
gacgccacccgggaggacatggtgcgggcggcacggctggccgaggccgaccacttcatc
gacgggttgagcgaccagcgcgggcgcggcggctacgacgtgctggtcggcgagcgcggg
gtcaagctgtcgggtgggcagcgccagcggatcgccatcgcccgcgtgatcctgaaggac
gcgccgatcctggtgctggacgaggcgacctccgccctggattccgaggtcgaggccgcc
atccagggccagctcaagaccctcatggagggcaagaccgtaatcgccatcgcgcaccgc
ctgtccaccatagcggcgctggaccggctggtagtgatggacggcggccgcgtcgtcgaa
gagggcagccaccgcgagctggtccggcgcggcggcctctacgcccgcctgtgggagcgc
cagtccggcggcttcctggggctgccggcggagtga
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