Skermanella mucosa: JL100_015980
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Entry
JL100_015980 CDS
T07652
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smuc03400
]
JL100_015980
Enzymes [BR:
smuc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JL100_015980
DNA repair and recombination proteins [BR:
smuc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JL100_015980
Prokaryotic type
JL100_015980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Ank_3
Motif
Other DBs
NCBI-ProteinID:
UEM18617
LinkDB
All DBs
Position
SKMUc:3467402..3468874
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AA seq
490 aa
AA seq
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MTSRSPVIVWFRHDLRLADNPALHHAAESGAPVIPLYLLDDGGADGVRPPGGAGRWWLHH
SLERLGAALARLGSPLVLSRGPAGEILDRLIAETGAGLVVWNRECEPAAARRDAAVREKL
AKRGVAVESFNGGLLVEPEQVRSKAGTPFKVFTPFWKTLSTAHDPARPLPAPAALTPPGS
AVASDSLAAWELLPTSPDWAGGLREDWTPGEGAAAERLADFLDAILRDYRTGRDRPGRDG
TSRLSPHLHWGEISPRQVWHATRHRAEAATGLEPAVEAFLREIGWREFTHGLLLTNPDMR
TEPMDSRFKALPWRNDDAGLKAWQRGRTGYPIVDAGMRQLWRTGWMHNRVRMIVGSFLVK
DLLLPWQAGEEWFWDTLVDADAANNSANWQWIAGCGADPAPFFRVFNPVLQGRKFDPDGS
YVRRYVPELERLPDRYVHEPWSAPAEVLAKAGVALGRTYPKPIVYHGAARDRALEAFRAV
KAAGKVAPPG
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgcgatctcccgtcatcgtctggtttcgccacgacctgcgccttgccgacaat
cccgcccttcaccatgcggcggagagcggggcgccggtgatccccttgtatctgctggac
gatggcggtgccgacggcgtgaggccgccgggaggcgccgggcgctggtggcttcaccat
agcctggagaggctgggtgcggcgctcgcccggctgggctcgccgctggtgctgagccgg
gggccggccggggagatcctcgatcgcctgatcgccgagaccggggccggccttgtggta
tggaaccgcgagtgcgagccggcggcggcccggcgggatgcggccgtacgggagaagctg
gcgaagcgcggcgtcgcggtcgagagtttcaacggcggcttgctggtcgagcccgagcag
gtacggtccaaggccggaacgcccttcaaggttttcacgccgttctggaagacgctttcc
accgcgcacgatccggcgcgcccgctgcccgcacccgcggcgctgacgccgccggggagt
gcggtggcatcggattccctggccgcctgggaactgctgccgacctcgcccgactgggcc
ggaggtctgcgggaggactggacccccggcgagggggccgcggcggagcggctcgcggat
ttcctcgacgcgatcctgcgggattacaggaccggccgcgatcgtcccggccgggacggc
acctcacggttgtcaccgcacctgcattggggcgagatctccccccggcaggtctggcac
gcgacgcggcaccgggccgaagcggcgacggggcttgagcccgcggtggaggcctttctg
cgggagatcggctggcgggaattcacccacgggcttctgctgaccaaccccgacatgagg
acggagccgatggacagccggttcaaggccctgccctggcggaacgacgatgccggcctg
aaggcttggcagcgggggcggacaggatatccgatcgtcgatgccgggatgcgccagctc
tggcggacgggatggatgcacaatcgggttcggatgatcgtcggctccttcctggtcaag
gacctgctgctgccctggcaggcgggggaggaatggttctgggacacgctggtcgatgcg
gacgccgccaacaacagcgcgaactggcagtggatcgccggctgcggcgccgatcccgcg
ccgttcttccgagtgttcaaccccgtgctccagggccgcaagttcgaccccgacggcagc
tatgtgcggcggtatgtgccggagttggaacggctgcccgaccgctacgtccacgaaccc
tggagcgccccggccgaggtgctggcgaaggccggcgtggcgctgggccggacctatccg
aagcctatcgtgtaccatggcgcggcacgcgaccgggcgctggaggccttccgggcggtc
aaggcggctgggaaagtcgctcccccgggctga
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