Skermanella mucosa: JL100_016065
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Entry
JL100_016065 CDS
T07652
Name
(GenBank) cache domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
smuc
Skermanella mucosa
Pathway
smuc02020
Two-component system
smuc02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JL100_016065
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
JL100_016065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
smuc02035
]
JL100_016065
Bacterial motility proteins [BR:
smuc02035
]
Flagellar system
Chemotaxis proteins
MCPs
JL100_016065
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
sCache_3_3
Cache_3-Cache_2
MCPsignal
sCache_3_2
HAMP
PqqF-like_C_4
EspB_PPE
DUF948
HisKA_3
Motif
Other DBs
NCBI-ProteinID:
UEM24063
LinkDB
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Position
SKMUc:3482279..3484021
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AA seq
580 aa
AA seq
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MLTAGGVTLNGNLDLVDRVQRLAGGVATIFAGDTRVATNVLKADGTRAIGTKLAQGPVYD
SIFRDKKDYFGEADILGRAYFTGYRPLLDRNGAVAGIVFVGIAKDDVFHAFDETITTAAL
YVPVGMTLFGLALWFFLKRAIHPIVRLERAAIALASGDDQVEIVATERTDEIGRLARALL
NLRGTVGDAFARRQVIEQLDLPVMTASGTDFLIEYMNPAAVGALNKVAHNLAIPVEGLQG
RSIDVFHQRDPQRIRAIVSDPNRLPHHARIRLGDDWMDLNISAMRNVRGEYKGPLLTWRL
ITDQVTAAADFEKSVGAIATAVRDATANVEQSARTTSEQAYTASSTAEAVADAAGAATAS
VTSVSAAIEELTSSIDTARGEASATTAAMEAASHEARRTNDIVVSLSQAASAIGTVVDLI
ANIAAQTNLLALNATIEAARAGDAGKGFAVVAHEVKSLATQTSKATDDIRREIDQIQGTT
REAVNAIGAIVQTIHEMGARAGATAAALEQQAAVAMSISRDTQQAATQTIAVNTDIRKIS
EVATQSGQELAGMLTVVQSLTQKSDELGGAIVTFVERLKR
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgctgacggccggcggcgtcacgctgaacggcaatctcgacttggtggaccgcgtacag
cggctggccggcggagtcgccaccatcttcgccggtgatacccgcgtggcaaccaacgtg
ctgaaggccgacggcacccgggcgatcggcacgaagctggcccaggggccggtgtacgac
agcatcttccgcgacaagaaggattatttcggcgaggccgacatcctgggacgggcctat
ttcaccgggtaccgcccgctgctggaccggaacggcgcggtcgccggaatcgttttcgtg
ggcatcgccaaggacgatgtcttccatgccttcgacgagaccatcacgaccgccgcgctc
tatgtgccggtcggcatgacgctgttcggactggcgctttggttcttcctgaaacgggcg
atccacccgatcgtcaggctggaacgggctgccatcgccctggcctcgggtgacgaccag
gtggagatcgtcgcgaccgaacggaccgacgagatcggccggctcgcgcgtgccctgctc
aaccttcgcggcacggtcggggacgccttcgcccgccggcaggtgatcgaacagctcgac
ctgccggtgatgaccgcgtcgggcaccgacttcctgatcgagtacatgaacccggccgcg
gtcggagcgctcaacaaggttgcgcacaatctggccatcccagtcgaaggattgcaaggt
cgcagcatcgacgtgttccaccagcgcgacccgcagcgcatccgggcgatcgtctccgat
cccaaccgactgccgcaccatgcccgcatccggctgggcgacgactggatggacctgaac
atcagcgcgatgcgcaacgtccggggcgagtacaaggggccgctgctgacctggcgcctg
atcaccgaccaagtcaccgcggccgccgatttcgaaaagtcggtcggtgccatcgcgacc
gccgtccgggacgccacggcgaacgtcgagcagtcggcgcgcaccacgtcggagcaggcc
tatacggcatcctccaccgccgaggccgtggccgacgcggcgggtgccgccacggcgtcg
gtgacctccgtctcggcggccatcgaggagctgacctccagcatcgataccgcccgcggc
gaggccagcgccaccaccgccgcgatggaagcggcctcccacgaggcgcgccggaccaac
gacattgtggtcagcctgtcccaggcggcctccgcgatcggcaccgtcgtggacctgatc
gccaacatcgcggcgcagaccaacctgctggcactgaacgcgaccatcgaggcggcgcgg
gcgggagacgccggcaagggcttcgccgtcgtcgcccacgaggtcaagtcgctggcgacc
cagacctccaaggcgaccgacgacatccggcgcgagatcgaccagatccagggcaccacg
cgggaggcggtgaacgccatcggcgccatcgtccaaaccatccacgagatgggcgcccgc
gccggcgccaccgccgcggccctggagcagcaggccgccgtggccatgtcgatcagccgc
gatacccagcaggccgccacccagaccatcgcggtgaacacagacatccgcaagatctcc
gaagtcgccacccagtccgggcaggaactggccggcatgctgacggtggtccagagcctg
acgcagaaatccgacgagcttggcggcgcgatcgtcaccttcgtcgagcggctgaaacgc
tga
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