Skermanella mucosa: JL100_016645
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Entry
JL100_016645 CDS
T07652
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00300
Lysine biosynthesis
smuc00470
D-Amino acid metabolism
smuc01100
Metabolic pathways
smuc01110
Biosynthesis of secondary metabolites
smuc01120
Microbial metabolism in diverse environments
smuc01230
Biosynthesis of amino acids
Module
smuc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JL100_016645 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JL100_016645 (lysA)
Enzymes [BR:
smuc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JL100_016645 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Thiopep_pre
Motif
Other DBs
NCBI-ProteinID:
UEM18725
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Position
SKMUc:3604104..3605372
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AA seq
422 aa
AA seq
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MNPYFTYRDGVLHAEDVALPALAAEVGTPFYCYSSAALEANYRAFATAFEGTDTGICYAL
KANSNLAVIRTLARMGAGADVVSEGEMRRALAGGVPADRIVFSGVGKTRGEMRAALEAGI
FQLNVESIPELEALSEVAASMGRTASIAIRVNPDVDARTHAKIATGKKENKFGIDIDHAR
EIYARAAALPGIAPVAVAVHIGSQLTSLEPFRAAFERVVELVHALRADGHDIKRLDLGGG
LGILYRDEEVPAVGAYAGMVRSITGNLGCHVTLEPGRALVGNAGILVTRVIFRKTGLHRE
FLIVDAAMNDLIRPSLYDAWHTILPVVEPSSDAPRSPIDVVGPVCESGDTFAVQRVLPHL
DQEDLVAFLSAGAYGAVMSSSYNTRPLIPEVLVSGGDQAVVRRRPTIDEMLAAEQVPAWL
DP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaacccttatttcacctatcgcgacggcgtgctgcatgccgaggacgtggcgctgccc
gccctcgcggcggaagtcggcacgcctttctactgctattcctcggcggcgctcgaagcg
aactaccgcgccttcgccacggccttcgaaggcaccgacaccggcatctgctacgccctg
aaggcgaactccaacctcgccgtgatccgcacactggccaggatgggcgccggcgccgat
gtggtatcggaaggcgagatgcgcagggcgctggccggcggcgtgccggcggaccggatc
gtcttctccggcgtcggcaagacgcgcggcgagatgcgggccgccctcgaggccggcatc
ttccagctcaacgtcgagtccattcccgagctggaggccctgagcgaggtcgcggcctcg
atgggccggaccgcctcgatcgcgatccgggtcaacccagacgtggacgcccggacccat
gccaagatcgcgacaggcaagaaggagaacaagttcggcatcgacatcgaccatgcgcgc
gagatctatgcccgcgccgccgcgctgccgggaattgcccccgtcgccgtcgcggtgcat
atcgggtcgcagctgaccagcctggagcccttccgcgccgccttcgagcgggtcgtggag
ctggtccatgcgctgcgcgccgacgggcacgacatcaagcgcctggaccttggcggaggc
ttgggcatcctgtaccgggacgaggaggttccggccgtcggcgcctatgccgggatggtc
cggagcatcaccggcaacctgggctgccacgtgacgctggagcccggacgggcgctggtc
ggcaacgccggcatcctggtgacccgggtgatcttccggaagaccgggctgcaccgcgag
ttcctgatcgtcgacgcggcgatgaacgacctgatccgcccctcgctttacgatgcctgg
cacaccatccttcctgtggtcgaaccgtcatccgacgcgccgcgatcgccgatcgacgtg
gtcgggccggtctgcgagtcgggggatactttcgcggtgcagcgggtcctgccacatttg
gaccaagaagatctggtggcattcctgtcggcgggagcctacggcgcggtgatgtcgtcg
agctacaacacccgcccgctgatccccgaggtgctggtttcggggggcgaccaagcggtg
gtccgccggcggccgaccatcgatgagatgctggcggcggaacaggtgccggcttggctt
gatccctga
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