KEGG   Skermanella mucosa: JL100_016645
Entry
JL100_016645      CDS       T07652                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
smuc  Skermanella mucosa
Pathway
smuc00300  Lysine biosynthesis
smuc00470  D-Amino acid metabolism
smuc01100  Metabolic pathways
smuc01110  Biosynthesis of secondary metabolites
smuc01120  Microbial metabolism in diverse environments
smuc01230  Biosynthesis of amino acids
Module
smuc_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:smuc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    JL100_016645 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    JL100_016645 (lysA)
Enzymes [BR:smuc01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     JL100_016645 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N Thiopep_pre
Other DBs
NCBI-ProteinID: UEM18725
LinkDB
Position
SKMUc:3604104..3605372
AA seq 422 aa
MNPYFTYRDGVLHAEDVALPALAAEVGTPFYCYSSAALEANYRAFATAFEGTDTGICYAL
KANSNLAVIRTLARMGAGADVVSEGEMRRALAGGVPADRIVFSGVGKTRGEMRAALEAGI
FQLNVESIPELEALSEVAASMGRTASIAIRVNPDVDARTHAKIATGKKENKFGIDIDHAR
EIYARAAALPGIAPVAVAVHIGSQLTSLEPFRAAFERVVELVHALRADGHDIKRLDLGGG
LGILYRDEEVPAVGAYAGMVRSITGNLGCHVTLEPGRALVGNAGILVTRVIFRKTGLHRE
FLIVDAAMNDLIRPSLYDAWHTILPVVEPSSDAPRSPIDVVGPVCESGDTFAVQRVLPHL
DQEDLVAFLSAGAYGAVMSSSYNTRPLIPEVLVSGGDQAVVRRRPTIDEMLAAEQVPAWL
DP
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaacccttatttcacctatcgcgacggcgtgctgcatgccgaggacgtggcgctgccc
gccctcgcggcggaagtcggcacgcctttctactgctattcctcggcggcgctcgaagcg
aactaccgcgccttcgccacggccttcgaaggcaccgacaccggcatctgctacgccctg
aaggcgaactccaacctcgccgtgatccgcacactggccaggatgggcgccggcgccgat
gtggtatcggaaggcgagatgcgcagggcgctggccggcggcgtgccggcggaccggatc
gtcttctccggcgtcggcaagacgcgcggcgagatgcgggccgccctcgaggccggcatc
ttccagctcaacgtcgagtccattcccgagctggaggccctgagcgaggtcgcggcctcg
atgggccggaccgcctcgatcgcgatccgggtcaacccagacgtggacgcccggacccat
gccaagatcgcgacaggcaagaaggagaacaagttcggcatcgacatcgaccatgcgcgc
gagatctatgcccgcgccgccgcgctgccgggaattgcccccgtcgccgtcgcggtgcat
atcgggtcgcagctgaccagcctggagcccttccgcgccgccttcgagcgggtcgtggag
ctggtccatgcgctgcgcgccgacgggcacgacatcaagcgcctggaccttggcggaggc
ttgggcatcctgtaccgggacgaggaggttccggccgtcggcgcctatgccgggatggtc
cggagcatcaccggcaacctgggctgccacgtgacgctggagcccggacgggcgctggtc
ggcaacgccggcatcctggtgacccgggtgatcttccggaagaccgggctgcaccgcgag
ttcctgatcgtcgacgcggcgatgaacgacctgatccgcccctcgctttacgatgcctgg
cacaccatccttcctgtggtcgaaccgtcatccgacgcgccgcgatcgccgatcgacgtg
gtcgggccggtctgcgagtcgggggatactttcgcggtgcagcgggtcctgccacatttg
gaccaagaagatctggtggcattcctgtcggcgggagcctacggcgcggtgatgtcgtcg
agctacaacacccgcccgctgatccccgaggtgctggtttcggggggcgaccaagcggtg
gtccgccggcggccgaccatcgatgagatgctggcggcggaacaggtgccggcttggctt
gatccctga

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