Skermanella mucosa: JL100_016715
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Entry
JL100_016715 CDS
T07652
Name
(GenBank) mechanosensitive ion channel family protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_016715
Transporters [BR:
smuc02000
]
Other transporters
Pores ion channels [TC:
1
]
JL100_016715
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
UEM18739
LinkDB
All DBs
Position
SKMUc:complement(3619516..3621651)
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AA seq
711 aa
AA seq
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MVVVRLILLALFLAAWFCPGLASAQPAVQASGAGVDAVIQAFPGGLTPEQTDALLSVMDG
EQVRAALRDRMLTEARTRAAAPRQSNPLAFYAGRLDAVVKAYPRIPAALADAFERPNGRD
AAIRPWRLAVSLLFLFAAGVLVWVALTRLPPAAPGSVLRSAARDLLRIGGFVAGLLLAYA
ILRPTHPAAPAIFVAALQAALTVLIADLIFRVLCAPGRPDLRLLPVGDQAAAAIHRSGIW
VAVLSAALLGLFDLLNALGMAYDPLIALILPISTLPFLYLAVQLWSRRRDIAALIGGYLN
LDLSASHGIGTGLVLATIYLAGLWLTLAAAALRLEPGTGLRLLASFVLAAAVPVTALLLH
RPVARFHESAGAVDGEASATTVRLMRAVWVSLLVLAVVATAFLWGFDAARQPGPFGIALR
LLFDAGVILLLGYVGWALLIRSFDRLIASQNDRDRRTAQRMATLLPLLRKFLQVALVAVV
VMIVLSSLGIAIGPLLAGAGVVGIAIGLGAQSTIADILSGIFFLLEDAFHIGDYVEVGQL
RGTVENISLRSLKLRHHRGAVHTLPFGQIKALTNYTRDWALMRLEFRVPPETDLNLVKKL
VKRISAELSDDPEMGPSFIEPLKSQGVRRVEDDAVIIGVKYIAKPGEQFTIRREAYQRII
KAFNENGIDLVGRGVVVRVDDPNAASRAVGFAAVEAIRDPFDGGKQTKEQA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcgtcagactgatcctcctggcgctcttcctggctgcctggttctgccccggt
ctcgcgtccgcccagccggccgtccaggcgtccggcgccggcgtcgatgcggtcatccag
gcgtttcccggagggctgacgcccgagcagacggacgccctgttgtcggtcatggacggc
gagcaggtccgcgccgccttgcgggacaggatgctgacggaggcgcggacccgggccgcg
gctccccggcaatccaatcccctcgcgttctacgccgggcgcctggatgccgtggtcaag
gcctatccccggattccggcggcgctggccgatgcgttcgaacggccgaacgggcgggat
gccgccatccggccatggcggctggcggtatcgctcctgttcctgttcgcggccggcgtc
ctggtctgggtggccctgacacggctgccgcccgcggcaccgggcagcgtgctgcggagt
gccgcacgtgacctgctgcggatcggcgggttcgtcgcgggcctgctgctggcctatgcg
atcctgcgcccgacccatcccgcggcacccgcgatcttcgtcgcggcgctccaggcggcc
ctgacggtactgatcgccgatctgatcttcagggtcctgtgcgcgcccgggcggccggac
ctgaggcttctgccggtgggcgaccaggcggcggcggcgatccaccgctccggcatatgg
gtcgccgtcctcagcgcggcgctgctcggcctgttcgacctgctgaacgcgctgggcatg
gcatacgatccgcttatcgccctgatcctgccgatcagcacgctgcctttcctgtacctg
gcggtccagctttggagccggcgccgggacatcgccgcgctgatcggcgggtatctcaat
ctcgacctttccgccagccacgggatcggcaccggcctggtgctggcgacgatctacctc
gccggcctttggctgacgctcgccgccgcggcgctgcggctggagccgggcacgggcctc
cgcctgctggccagcttcgtcctggcggccgcggttccggtgaccgccctgctgctgcac
cgtccggtcgcccgattccacgaatcggcgggtgccgtcgacggcgaggcgtccgccacc
accgtgcggctgatgcgggcagtctgggtctcgctgctggttctggcggtagtcgccacg
gccttcctctggggattcgacgccgcgcggcagccgggcccgttcggcatcgcgctgcgg
ctgctgttcgacgccggcgtgatcctgctgctcggctatgtcggctgggcgctgctgatc
cggagcttcgaccgcctgatcgcgtcccagaacgaccgtgaccgccggaccgcccagcgg
atggcgaccctgctgccgctgctccgcaagtttctccaggtggcattggtggccgtcgtc
gtgatgatcgtgctgtcctccctgggaatagccatcgggccgctgctggcgggcgccggc
gtggtcggcatcgcgatcgggctgggtgcccagtcgaccatcgccgacatcctgtccggc
atcttcttcctgctggaggacgccttccatatcggggactatgtcgaggtcggccagctc
cggggcaccgtggagaacatctcgctccgctcgctcaagctgcgccaccaccgcggcgcg
gtccacacgcttcccttcggccagatcaaggccctgaccaactacacccgcgactgggcg
ctgatgcggctggagttccgcgtgccgccggaaaccgacctgaacctcgtcaagaagctg
gtgaagcgtatcagcgccgaactgtccgacgacccggagatgggacccagcttcatcgag
ccgctgaagtcccagggggtgcgccgggtggaggacgatgccgtgatcatcggggtaaag
tacatcgccaagcccggagagcagttcaccatccggcgcgaggcctatcagcggatcatc
aaggcgttcaacgagaacggcatcgaccttgtcggccggggcgtggtcgtccgggtcgac
gatccgaacgccgcaagccgcgcggtcgggttcgccgcggtcgaggcgatccgggacccg
ttcgacggcggaaagcaaacgaaggagcaggcatga
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