Skermanella mucosa: JL100_017000
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Entry
JL100_017000 CDS
T07652
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
smuc
Skermanella mucosa
Pathway
smuc02010
ABC transporters
smuc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JL100_017000
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL100_017000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_017000
Transporters [BR:
smuc02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
JL100_017000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
ABC_sub_bind
Peripla_BP_1
Bac_luciferase
DUF7192
Peripla_BP_4
Peripla_BP_A-cyclase_1
Diphthami_syn_2
Motif
Other DBs
NCBI-ProteinID:
UEM18795
LinkDB
All DBs
Position
SKMUc:complement(3677473..3678600)
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AA seq
375 aa
AA seq
DB search
MSRMLATVGAIALGSLLATPVMAQETVTIGAIEILSGPSAAYGTAIKGGLELAMDEINAK
GGVLGGKKLALIVEDSAGNKDQAVNAARKLVGRDKVPVVIGPTLSNEMFAVGPVTNGREV
VTVGTSTTAKGITEIGPFIFRTSLPESDVVPVTLKTAQEKFGIKKIAMMYANDDAFSKSG
FDSMKAAAEELGLEIATIETFGSKDTDFSAQLTKIKGLGVDAITISALVEPISGVVLQAR
QLGIPSSVRFIGGNGANSPKLGEIAGAAADGLLVGSPWFIAKPDEANRKFVAEYKKRNGK
DPDQFAAQAYDTMYIVAQAIDRAGAAESDKIRQALYKTDFNGVMGPFTFTEGRDPASNEG
VVVLSMKNGRFEILE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggatgcttgcgacggtaggggcgatcgcgctcggttcgctcctggcgacgcct
gtcatggcgcaggagacggtgaccatcggcgccatcgagatcctgtccgggccgagtgcc
gcctacggcaccgccatcaagggcggcctcgaactggcgatggacgagatcaacgccaag
ggcggcgtgctcggcgggaagaagctggcgctgatcgtcgaggactcggccggcaacaag
gaccaggcggtcaacgccgcgcgcaagctggtcggccgcgacaaggtgccggtcgtgatc
ggcccgacgctgtccaacgagatgttcgccgtcggcccggtcaccaacgggcgcgaggtg
gtcacggtcggcacctcgaccaccgccaagggcatcaccgagatcgggccgttcatcttc
cgcacgtcgctgccggaatccgacgtcgttccggtcacgctgaagacggcgcaggagaag
ttcggcatcaagaagatcgcgatgatgtacgcgaacgacgatgccttcagcaagtcgggc
ttcgacagcatgaaggccgcggccgaggaactggggctggagatcgcgacgatcgagacc
ttcggcagcaaggataccgacttctcggcccagctgaccaagatcaagggtcttggcgtc
gacgccatcaccatctcggcgctggtcgagccgatctccggcgtcgtcctccaggcgcgc
cagctcggcattcccagcagcgtccgcttcatcggcggcaacggcgccaactcgccgaag
ctgggtgagatcgcgggcgccgcggccgacggcctgctggtcggcagcccatggttcatc
gccaagccggacgaggcgaaccggaagttcgtggccgagtacaagaagcggaacggcaag
gaccccgaccagttcgcggcccaggcctatgacacgatgtacatcgtggcccaggcgatc
gaccgggcgggtgcggccgaaagcgacaagatccgccaggcgctctacaagaccgacttc
aacggcgtcatggggccgttcaccttcaccgaaggccgcgatcccgcctcgaacgagggc
gtcgtcgtgctgtccatgaaaaacggccggttcgaaatcctggagtag
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integrated database retrieval system
