Skermanella mucosa: JL100_017435
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Entry
JL100_017435 CDS
T07652
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
smuc
Skermanella mucosa
Pathway
smuc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL100_017435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_017435
Transporters [BR:
smuc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JL100_017435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UEM18874
LinkDB
All DBs
Position
SKMUc:complement(3769701..3771314)
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AA seq
537 aa
AA seq
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MDKFARSLMGAAFVALAVVGTGVGTAAPALADTPKDALVMAWQFDDIISLDPAEIFELSG
AEYGAQVYERLISYDVNDVSKILPGLAESWEVSDDGMTYTFKIRDGVKFHSGNALTAEDA
AYSLRRAVKLNKSPAFILTQFGFTKDNVDQKVRATDARTLVMETDQAYAPTFVLYCLTAG
VASIVDAKLVQQNEKDGDFGTSWLKTNSAGSGPFKLRQWKASEMLMLDAYPDYWQGGPAM
KRVIIRHIPEPATQRLLLEKGDVDVARNLKPEQFEPLRASKDVRLVEAPKGTLWYISLNQ
KNEILAKPEVRKAMRYLVDYDAMRGSIMNGLGTIHQAFLPKGFLGAVEDKPFKYDPAKAR
ELLAAAGYPNGFTVTMDVRNTSPTMDIAQTIQASAAAAGVKIELLPMDGKQALTKYRARN
QDIYIGQWGPDYQDPHTNAETFASNPNNADDGTSKTLAWRNAWDIPELTKKTASAVLERD
AGKRAATYRELQKTVMEDGPFVVMFQQVEVPAVRANVEGLVWGPSFDTNLYRLATKK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacaagttcgcccggagtctgatgggagccgccttcgtggcgctcgcggtcgtggga
accggcgtcgggaccgcagcgccggccctggcggacacgccgaaggatgcgctggtcatg
gcctggcagttcgacgacatcatcagcctcgatccggccgagatcttcgaactgtcgggc
gccgagtacggcgcccaggtctatgagcggctgatctcctacgacgtgaacgacgtcagc
aagatcctgcccgggctggcggaaagctgggaggtctcggacgacggaatgacctatacc
ttcaagatccgcgacggcgtcaagttccactccggcaatgccctgaccgccgaggatgcg
gcctattcgttgcgccgcgcggtcaagctgaacaagtcgccggccttcatcctgacccag
ttcggctttaccaaggacaacgtggaccagaaggtccgggccaccgacgcccgcacgctg
gtgatggagaccgaccaggcctatgccccgaccttcgtcctgtactgcctgaccgccggc
gtcgcctcgatcgtcgatgccaagctggtccagcaaaacgagaaggacggcgatttcggg
accagctggctgaagaccaattccgccggctccggcccgttcaagctgcgccagtggaag
gccagcgagatgctgatgctggacgcctacccggattactggcagggcggtcccgccatg
aagcgggtgatcatccgccacatccccgagcccgccacccagcggctcctgctggagaag
ggcgacgtggacgtcgcgcgcaacctcaagcccgagcagttcgaaccgctccgcgcgtcc
aaggacgtccggctggtcgaggcgcccaagggcacgctctggtatatcagcctcaaccag
aagaacgagatcctcgccaagcccgaggtccgcaaggcgatgcgctacctggtcgattac
gacgccatgcgcggcagcatcatgaacggcctgggcaccatccatcaggcgttcctgccc
aagggcttcctgggcgccgtggaggacaagccgttcaagtacgacccggcgaaggcgcgc
gaactgctggccgccgccggctatcccaacggattcaccgtcaccatggacgtgcgcaac
acctcgccgaccatggacatcgcgcagaccatccaggccagcgccgccgcggccggcgtg
aagatcgagctgctgcccatggacggcaagcaggcgctgaccaagtaccgggcgcgtaac
caggacatttatatcggccagtggggtcccgactaccaggacccgcacaccaacgccgag
accttcgcgtccaacccgaacaacgcggacgacggcacgtccaagacgctcgcctggcgg
aatgcctgggacattcccgagcttacgaagaagaccgcatcggccgtgctggagcgggac
gccggcaagcgcgcggccacataccgggaactgcagaagacggtgatggaggacggcccc
ttcgtcgtgatgttccagcaggtcgaagtcccggcggttcgcgccaacgtggaagggctc
gtctggggacccagcttcgacaccaacctgtaccggctcgcgaccaagaagtag
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