Skermanella mucosa: JL100_018280
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Entry
JL100_018280 CDS
T07652
Name
(GenBank) DctP family TRAP transporter solute-binding subunit
KO
K11688
TRAP-type transport system periplasmic protein
Organism
smuc
Skermanella mucosa
Pathway
smuc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JL100_018280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_018280
Transporters [BR:
smuc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JL100_018280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
TAT_signal
HTH_35
Motif
Other DBs
NCBI-ProteinID:
UEM19035
LinkDB
All DBs
Position
SKMUc:3935809..3936834
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AA seq
341 aa
AA seq
DB search
MNKSAEGLNRRSVLAFGAAAAALTVIRPGSARAAATIRLAVADPAGSSVGKAAARFAELV
RESTGGAVQIMVFPDGVLFGNDQNAAVNQLGGGALDGLILASSVYASFEPRMNAVSLPYL
FSDYDQLRGYLRGAPGQELLGSLDRFKIVGLGMMLRTFRNTTTRDRAITRVEDFQGLKVR
VPNNQLFVRLFRALNANPTPMAFSEVYTALQLGAIDGQENPVEVPLNNRFYEVQKHLNLT
RHVADSYLLGLSRPAWQRIPEDQRENVRAAAAKMAEEHNENEIRQEASIIAALREKGMTV
NELGAGEPQKLQQIAAGLYPEFSESIGKEFLDKSLAFVGKS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtctgccgaaggattgaaccgccgatcggttctggcgttcggcgccgcggcc
gcggcgctcacggtgatccggccgggttccgcccgggccgcggccacgatcaggctggcg
gtcgcggaccccgcgggctcgtctgtcggcaaggctgcggcgcggttcgcggagctggtc
cgggaatcgaccggcggcgccgtgcagatcatggtctttcccgacggcgtcctgttcggc
aacgaccagaacgcggcggtcaatcagctcggcggcggcgcgctcgacgggctgatcctg
gcgagcagcgtctacgcgtcgttcgagccgcgcatgaacgcggtcagcctgccctacctg
ttctccgactacgaccagctcaggggctatctccgcggcgcgccaggacaggaactgctc
ggttcgctcgaccgcttcaagatcgtcggcctgggcatgatgctgcggaccttccgcaac
acgacgacgcgggacagggcgatcacccgggtggaggacttccagggcctcaaggtgcgc
gttccgaacaaccagctcttcgtccggctgttcagggcgctcaacgccaatccgacgccc
atggccttctcggaagtctacaccgcgctccagctcggcgcgatcgacggccaggagaat
cccgtcgaggtgccgctcaacaaccggttctacgaggtccagaagcacctgaacctgacc
cggcacgtggcggactcctacctgctcggcctcagccgccccgcctggcagcgcattccc
gaggaccagcgggagaacgtgcgtgccgccgcggcgaagatggccgaggagcacaatgaa
aacgagatccggcaggaggcttcgatcatcgccgcgctccgcgagaagggcatgacggtg
aacgagctcggagccggagaaccccagaagctccagcagatcgcggccggcctctatccc
gagttctccgaaagcatcgggaaggagttcctggacaagagccttgccttcgtgggcaag
tcgtga
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