Skermanella mucosa: JL100_019120
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Entry
JL100_019120 CDS
T07652
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00280
Valine, leucine and isoleucine degradation
smuc00650
Butanoate metabolism
smuc00907
Pinene, camphor and geraniol degradation
smuc01100
Metabolic pathways
smuc01120
Microbial metabolism in diverse environments
smuc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JL100_019120
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JL100_019120
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JL100_019120
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JL100_019120
Enzymes [BR:
smuc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
JL100_019120
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Motif
Pfam:
HMGL-like
HisG_C
MCH
Motif
Other DBs
NCBI-ProteinID:
UEM19199
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Position
SKMUc:complement(4106399..4107331)
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AA seq
310 aa
AA seq
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MRDKAYLREVGLRDGLQMVKRILPADLKVEWCREEAAAGVGEIEVTSFVPAKIVPQFADA
LDVAERTGRIGGFRQSALVPNLKGAERGFDLGIHKLNYVLSASETHNLANVRRSTGESIA
DFHRIVDARAARGLGDVVLCGGVATAFGCTMEGAVDEGRVVEIVDRLLEAGADEIVVADT
VGYGNPAQVRRLLGRVVERCGDVPVAAHFHDTRGLGLANVTAAVEAGVRRFDASLGGLGG
CPFAPGATGNIDSEDCAFLLESMGFDTGIDIDALIALRRKVETWLPDEKFHGMVAQAGLP
KHYRPAALAA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcgggacaaagcatatctgcgcgaagtggggctgcgcgacggcctccagatggtcaag
cgcatcctgccggcagacctcaaggtcgaatggtgccgggaagaggcggcggccggcgtc
ggcgagatcgaggtgacctccttcgtgcctgccaagatcgtgccgcagttcgccgacgcc
ctggacgtggcggagcggaccggccggatcggcggtttccgccagtcggccttggtgccg
aacctgaagggggctgagcgcggattcgacctgggtatccacaagctaaactacgtcctg
tccgccagcgagacgcacaacctcgccaacgtccgccgttccaccggggaatcgatcgcg
gatttccaccgcatcgtggatgcgcgcgccgcccgcggcctgggcgacgtcgtcctgtgc
ggcggcgtcgccacggccttcggatgcaccatggagggtgccgtcgacgagggccgggta
gtggagatcgtggaccggctgctggaagccggggcggacgagatcgtcgtcgccgacacc
gtcggctacggcaacccggcgcaggtgcggcggctgctcggccgggtggtcgaacgctgc
ggcgacgtgccggtcgcggcccatttccacgatacccgcggcctgggcctcgccaacgtc
acggccgccgtcgaggcgggcgtgcgccggttcgacgcctctctcggcggcctgggcggc
tgcccgttcgcgccgggcgccaccggcaacattgacagcgaggattgcgccttcctgctg
gaatccatgggcttcgacaccggcatcgacatcgacgcgctgatcgccctgcgccggaag
gtcgagacctggctgcccgacgagaaattccacgggatggtcgcgcaggccggcttgccc
aagcattaccggccggccgcactggcggcctga
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