Skermanella mucosa: JL100_019180
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Entry
JL100_019180 CDS
T07652
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
smuc
Skermanella mucosa
Pathway
smuc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL100_019180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_019180
Transporters [BR:
smuc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JL100_019180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UEM19210
LinkDB
All DBs
Position
SKMUc:4118785..4120383
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AA seq
532 aa
AA seq
DB search
MVKRTDGSFPATTLPGLTAAGSTRRQFLAGASSLALGAALGLAGTAAWTLPASAQGTPRR
GGSLKIAVPAATSIDPVRLNSSGGIAIVQQVAEYLVYAEPDLTLRPVLATSWEPSEDGKV
WTFALRQGVKFHDGRPLTADDVVATFQRLVDPANASPAAGAMPFLKKEGVAKVDDHTVRF
TLDRPIGTFPYFTHTYNCVILPADYAGNFAEKPIGTGPFKLVSYRPQEGAKFERNADYWD
QPKPYLDRLEIQTFESPQPMVLALQSGDVQVVQQLSYIDAQGIRSDNNITLIQADAADHR
QLCMRTDMKPFDDKRVRQAVALCFDRPAMVRGLLGGLADVANDHPIAPIYPEQIELAQRQ
ANVAQARQLLADAGYPQGFPIDLYTHQYLELPQFAALAQQMLAPAGIKVNLKVEPTNLYY
NHWTEVSFGLTDWTSRPVAAQILAQSFRGSAEWNAAHWKNEAFDALLARFEAEPDVERRG
KLGSEMAAILNDEVPAVIAYFNKNLRAARTNVKGLTGSMSNYLDMTRTWLDA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagcgcaccgatgggagctttcccgccactaccctgccgggcctgacggccgca
ggctccacccgccgccagttcctcgccggagcgtcgtcgctggcgctgggggccgccctc
gggctggccggaacggcggcatggaccctcccggcatccgcgcagggcacgccccggcgc
ggcggctcgctcaagatcgcggtcccggccgccacctcgatcgacccggtccggctgaac
agctcgggcggcatcgcgatcgtccagcaggtcgcggaatacctcgtctatgccgagccc
gacctgaccctgcgcccggtgctggcgacctcgtgggagccgagcgaggacggcaaggtc
tggaccttcgcgctgcgccagggggtcaagttccacgacgggcgcccgctgaccgccgac
gacgtggtcgccaccttccagcggctggtcgatccggccaacgcgtccccggccgccggc
gccatgccgttcctgaagaaggagggcgtcgccaaggtggacgaccataccgtccgcttc
acgctcgaccggccgatcgggacgttcccctatttcacccacacctataactgcgtgatc
ctgcccgccgactacgccggcaatttcgccgagaaaccgatcggcaccgggccgttcaag
ctggtctcctaccggccccaggaaggggcgaagttcgagcgcaacgccgactattgggat
cagcccaagccctatctggacaggctggagatccagaccttcgaatcgccgcagcccatg
gtgctggccctccagtccggcgacgtccaggtggtccagcagctcagctacatcgacgcc
cagggcatccggagcgacaacaacatcaccctgatccaggccgacgccgccgaccaccgg
cagctctgcatgcgcaccgacatgaagccgttcgacgacaagcgggtccgacaggccgtc
gccctctgcttcgaccgcccggccatggtgcggggcctgctgggcggcttggccgacgtg
gcgaacgaccaccccatcgcgcccatatatcccgagcagatcgagctggcgcagcgccag
gccaacgtcgcccaggcacgccagctgctggccgacgccggatatccccagggcttcccg
atcgacctctacacccaccagtacctggagctgccgcagttcgcggcgctggcccagcag
atgctggcgcccgccgggatcaaggtcaatctcaaggtcgagccgaccaacctctattac
aaccattggacggaggtcagcttcggcctgaccgactggaccagccgaccggtcgcggcc
cagatcctggcgcagtcgttccgcggctccgccgaatggaacgccgcccactggaagaac
gaggcgttcgacgccctgctcgcccggttcgaggcggaaccggacgtggagcggcgcggc
aagctgggctccgagatggcggcgatcctcaacgacgaggtcccggccgtcatcgcctat
ttcaacaagaacctgcgggcggcccgcaccaacgtgaaaggcctgaccggcagcatgtcc
aactatctcgacatgacccggacctggctggacgcctga
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