Skermanella mucosa: JL100_019560
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Entry
JL100_019560 CDS
T07652
Name
(GenBank) PAS domain S-box protein
KO
K14986
two-component system, LuxR family, sensor kinase FixL [EC:
2.7.13.3
]
Organism
smuc
Skermanella mucosa
Pathway
smuc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JL100_019560
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smuc01001
]
JL100_019560
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
smuc02022
]
JL100_019560
Enzymes [BR:
smuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
JL100_019560
Protein kinases [BR:
smuc01001
]
Histidine kinases
LuxR family [OT]
JL100_019560
Two-component system [BR:
smuc02022
]
LuxR family
FixL-FixJ (nitrogen fixation)
JL100_019560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
HATPase_c
PAS_8
PAS_4
Diguanyl_cycl_sensor
HisKA
PAS_3
PAS_7
PAS_10
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
UEM19280
LinkDB
All DBs
Position
SKMUc:4201904..4203427
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AA seq
507 aa
AA seq
DB search
MEKHPIPAADDDKLRALIDTAPDGIVIIDRFGNIQTCNSACLRLFGYAPEEVLGRNVKML
MPDPYREEHDGYLRNYRETGHRKIIGIGREVHGRRKDGSVFPMELSVGEAGADEDRIFIG
IIRDITERKQQEAVLLERKARLTSILETVPDAIIVIDQHGIIESFSPAAERLFGYAADDA
VGRNVSMLMPAPYRAAHDGYMDHYLTTGEKRIIGIGRVVVGQRADGTTFPMDLAVGEVTL
AGRRLFTGFVRDLTEHQHAEKRLQDLQSELLHVSRFSAMGQMSSTLAHELNQPLTAITNY
VKACRRMMDAAEHKPGVKVLETMDKAVAQATRAGQIIRRMRDFIEKGQTDRTAEPINKVI
EEASALALVGAKQDNIRVHFDLTPDAPAVWIDKIQIQQVVLNLVRNAMESLALSPVRDLT
IATAITHDDLVEVCVRDTGPGLAPVVAANLFQPFVTTKEKGMGLGLSICRSIIDAHGGRL
WVTPNPEGGVTFHFTVEVARPEDRNDD
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagcacccaattcccgcagccgacgacgacaagctgcgcgccctgatcgacacc
gcccccgacggcatcgtcatcatcgacaggttcggcaacatccagacctgcaattcggcg
tgcctgcgactgttcggctatgcgccggaggaggtgctgggccggaacgtcaagatgctg
atgcccgacccctaccgggaggagcacgacggctacctgcggaactaccgggagacgggc
caccgaaagatcatcggcatcggccgcgaggttcacggccggcgtaaggacggctccgtc
ttcccgatggaactgtcggtcggcgaggccggggcggacgaggaccgcatcttcatcggc
atcatccgcgacatcaccgagcgcaagcagcaggaggccgtcctgctcgaacggaaggcc
cgcctcacctccatcctggagacggtgcccgacgcgatcatcgtgatcgaccagcacggc
atcatcgaatcgttcagtccggccgcggaacggctgttcggctacgcagccgacgacgcc
gtggggcgcaatgtcagcatgctgatgccggccccctaccgcgccgcccatgacggctac
atggatcattacctgacgaccggggagaagcggatcatcgggatcggccgggtggtcgtc
ggccagcgagcggacggcaccactttcccgatggacttggcggtgggcgaagtcaccctg
gcggggcgccggctgttcaccgggttcgtccgcgacctgacggagcaccagcatgccgag
aagcggttgcaggaccttcagtcggagcttctgcacgtctcccgcttcagcgccatgggg
cagatgtcctcgaccctggcgcatgagctgaaccagccgcttaccgccatcaccaactat
gtcaaggcatgccggcgcatgatggacgccgcggagcacaagccgggcgtcaaggtgctg
gagaccatggacaaggcggtcgcccaggcgacccgcgccgggcagatcatccgccgcatg
cgggacttcatcgagaagggccagaccgaccgcaccgccgaaccgatcaacaaggtgatc
gaggaggcgagcgcccttgcgctggtcggcgccaagcaggacaacatccgggtccatttc
gacctgacgccggacgccccggcggtgtggatcgacaagatccagatccagcaggtggtc
ctgaacctggtgcggaacgccatggagtcgcttgccctgagccccgtccgcgacctgacg
atcgccacggcgatcacccacgacgacctggtcgaggtctgcgtcagggataccggaccg
ggcctggccccggtggtggcggccaacctgttccagccgttcgtgaccaccaaggagaag
ggaatgggcctgggcctgtcgatctgccgctcgatcatagatgcccatggcgggcgcctg
tgggtcacgcccaaccccgagggcggcgtgactttccatttcacggtggaggttgcccgc
ccggaggacaggaatgatgactga
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