Skermanella mucosa: JL100_020060
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Entry
JL100_020060 CDS
T07652
Name
(GenBank) SDR family NAD(P)-dependent oxidoreductase
KO
K17947
dTDP-L-rhamnose 4-epimerase [EC:
5.1.3.25
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00523
Polyketide sugar unit biosynthesis
smuc01110
Biosynthesis of secondary metabolites
smuc01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JL100_020060
Enzymes [BR:
smuc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.25 dTDP-L-rhamnose 4-epimerase
JL100_020060
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
NAD_binding_10
NAD_binding_4
NmrA
adh_short
RmlD_sub_bind
KR
TrkA_N
3HCDH_N
DUF7243
Motif
Other DBs
NCBI-ProteinID:
UEM19371
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Position
SKMUc:4311978..4313096
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AA seq
372 aa
AA seq
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MSKKILITGGAGFIGSHLADELIAAGHEVRVLDNLSEQVHGTSGARPEYLSRDIELRVGD
VRDPAAVKSALQGIDAVYHFAAMVGVGQSMYQVDDYVGVNDLGTAVLLQALIERPVERLV
VASSMSIYGEGLYRDIRGEIVTPAERSLSRLKDGMWEPLGPDGGEITPVPTTEDKAPTLS
SIYALNKYVQERMCLMIGQAYNIPTVAMRFFNVFGTRQALSNPYTGVLAIFASRLLNGNP
PMIFEDGLQRRDFVHVADVARACHLALNARDAAGQVFNVGSGDSYSVVEVAEQLAASLGK
SRIAPTLTRKFRVGDIRHCFADIGKAQRLLGYRPETSLADGMVELAAWLDGQIAVDRVDQ
ASRELAARGLAV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaagatactcatcactggcggagccggcttcataggctcgcatctggccgac
gaactcattgccgccggccatgaagtccgggttttggacaatttatccgagcaggtccac
ggcaccagcggcgcccggccggagtatctgagccgtgacatcgagctgcgcgtcggcgac
gtgcgcgatccggccgcggtcaagtccgcgctgcaaggcatcgatgccgtctatcacttc
gccgccatggtcggcgtgggccagagcatgtaccaggtcgacgactatgtcggcgtcaac
gatctcggcaccgcagtgctgctccaggcgctgatcgagcggcctgtcgagcggctggtg
gtcgccagcagcatgagcatctacggcgaagggctgtatcgcgacatcaggggcgagatc
gtcaccccggccgaacgcagcctttccaggctgaaggacggaatgtgggagccgctcggc
ccggacggcggcgagatcacccctgtcccgacgacggaggacaaggcgccgacgctgtcg
tcgatctatgcgctcaacaaatatgtgcaggagcgcatgtgcctgatgatcgggcaggcc
tataatatcccgaccgtcgcgatgcgcttcttcaacgtgttcggcacccgccaggccctt
tccaacccctatacgggcgtgctcgcgatcttcgcctcccggctgctcaacggcaatccg
ccgatgatcttcgaggacgggctgcagcgccgtgacttcgtccatgtggccgacgtggcg
cgcgcctgccatctggcgctgaacgccagggacgccgcgggccaggtcttcaatgtcggc
agcggcgacagctacagcgtggtcgaggtggcggagcaactcgccgcctcgctcggcaag
tcgcgcatcgcgccgacgctgaccaggaagttccgcgtcggcgacatccggcactgcttc
gccgacatcggcaaggctcagcggctactgggctaccggccggagacgtcgctggccgac
ggcatggtcgagctggcggcctggctcgacggccagatcgcggtggaccgcgtagatcag
gcgagccgtgagctggcggccagaggattggccgtatga
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