Skermanella mucosa: JL100_020310
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Entry
JL100_020310 CDS
T07652
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
smuc
Skermanella mucosa
Pathway
smuc02024
Quorum sensing
smuc03060
Protein export
smuc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JL100_020310 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JL100_020310 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL100_020310 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
smuc02044
]
JL100_020310 (ffh)
Enzymes [BR:
smuc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
JL100_020310 (ffh)
Secretion system [BR:
smuc02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JL100_020310 (ffh)
Eukaryotic Sec-SRP protein
JL100_020310 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
AAA_31
AAA_33
TctA
ArsA_ATPase
AAA_14
Rap-GAP_dimer
DASH_Hsk3
Motif
Other DBs
NCBI-ProteinID:
UEM19417
LinkDB
All DBs
Position
SKMUc:complement(4359196..4360560)
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AA seq
454 aa
AA seq
DB search
MFEGLTGRLGDIFDRLTRRGALSEEDVGIALREVRVALLEADVALPVVKQFIAGVKEKAV
GQEVLRSVTPGQMVVKIVHDHLVEMLGSSSEGINLEAAAPVPILMVGLQGSGKTTSTAKI
ALRLKTRERKKVLMASLDTRRPAAQEQLKILGEQVQVATLPIVPGQQPVEIAKRAMQTGR
VEGYDVVMLDTAGRLAIDDELMAEVAAVRDATKPVETLLVVDAMTGQDAVTVATNFQDRV
GISGIVLTRIDGDARGGAALSMRQITGKPIKLLGVGEKVDALEAFHPDRIAGRILGMGDV
VSLVEKAAENIDKAEAEKLAKKMEKGTFDLDDMANQLKQIRKMGGMGGMLGMLPGIGKIK
NQLKDANIDEGILKKQEAIISSMTKAERRNPDLIKASRKRRIALGSGVQVQDVNRLLKQF
QDMQTMMKKVKKMGQKGMMRQGLAGLLPRGKGFP
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagggctgaccggacggctgggagacatcttcgatcgtctcacgcggcgtggc
gcgctgagcgaggaggatgtcgggatcgctctgcgcgaggtgcgcgtcgccttgctcgaa
gccgacgtggccttgcccgtcgtcaagcagttcatcgccggcgtcaaggagaaggccgtc
ggccaggaggtcctgcgctcggtgaccccgggccagatggtcgtcaagatcgtccacgac
catctggtcgagatgctgggctcgtccagcgaaggcatcaacctcgaagccgccgccccc
gtgccgatcctgatggtcggcctccagggctcgggcaagaccaccagcaccgccaagatc
gcgctccgcctcaagacccgcgagcgcaagaaggtcctgatggcctcgttggacacaagg
cgcccggcggcccaggaacagctcaagatcctcggcgagcaggtccaggtcgcgaccctc
ccgatcgtccccggccagcagccggtggagatcgccaagcgcgccatgcagaccggccgc
gtcgaaggctacgacgtcgtcatgctcgacaccgccggccggctcgccatcgacgacgag
ctgatggccgaggtggccgccgtccgcgacgcgaccaagccggtcgagacgctgctggtc
gtggacgccatgaccggccaggacgcggtgacggtcgcgaccaacttccaggaccgcgtc
ggcatctccggcatcgtgctgacccggatcgacggcgacgcccgcggcggcgccgcgctg
tcgatgcgccagatcaccggcaagccgatcaagctgctgggcgtcggcgagaaggtggac
gcgctcgaagccttccaccccgaccgcatcgccggccgcatcctgggcatgggcgacgtg
gtcagcctggtcgagaaggccgccgagaacatcgacaaggcggaggccgagaagctcgcc
aagaagatggagaagggcaccttcgaccttgacgacatggcgaaccagctcaagcagatc
cgcaagatgggcggcatgggcggcatgctcgggatgctgcccggcatcggcaagatcaag
aaccagctcaaggacgccaacatcgacgagggcatcctgaagaagcaggaagccatcatc
tcgtccatgaccaaggccgagcggcgcaatcccgacctcatcaaggcgtcgcgcaagcgc
cgcatcgccctggggtcgggcgtacaggtccaggatgtcaaccggctgctcaagcagttc
caggacatgcagaccatgatgaagaaggtcaagaagatgggccagaaaggcatgatgcgc
cagggtctggccggtctccttccccgcggcaagggctttccgtaa
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