Skermanella mucosa: JL100_020630
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Entry
JL100_020630 CDS
T07652
Symbol
fumC
Name
(GenBank) class II fumarate hydratase
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00020
Citrate cycle (TCA cycle)
smuc00620
Pyruvate metabolism
smuc00720
Other carbon fixation pathways
smuc01100
Metabolic pathways
smuc01110
Biosynthesis of secondary metabolites
smuc01120
Microbial metabolism in diverse environments
smuc01200
Carbon metabolism
Module
smuc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
smuc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JL100_020630 (fumC)
00620 Pyruvate metabolism
JL100_020630 (fumC)
09102 Energy metabolism
00720 Other carbon fixation pathways
JL100_020630 (fumC)
Enzymes [BR:
smuc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
JL100_020630 (fumC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
UEM19479
LinkDB
All DBs
Position
SKMUc:complement(4420950..4422350)
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AA seq
466 aa
AA seq
DB search
MAEKPAFRTESDSFGPIEVPADRYWGAQTQRSLQNFKIGGERMPAPLVRALGIQKKAAAM
ANMSLGVLDAKIGQAMLDAAEEVIDGTLIDHFPLVVWQTGSGTQTNMNANEVISNRAIEI
LGGEMGSKKPVHPNDHVNMGQSSNDSFPTAMHIAAVEQVHHELVPSLEHLHSALDAKAKD
FAEIVKIGRTHLQDATPLTLGQEFSGYATQVAYGIERVKAMLPRLLQLAQGGTAVGTGLN
AKKGFAEDFAKNVEQITGLPFVTAPNKFEALAAHDALVEGSGALNTVAVSLFKIANDIRL
LGSGPRCGIGEISLPENEPGSSIMPGKVNPTQSEAMTMVCAHVMGNHTAVTFAGANGHFE
LNVFKPVIIYNFLQSVRLLADAARSFTDNCVVGIEVNLDRVTKLMNESLMLVTALNPHIG
YDNAAKIAKKAHKEGTTLVEAGVALGLLTPEQFDQWVRPLDMIGPR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaagccagcgtttcgcaccgaatccgacagtttcggtcccatcgaagtaccg
gccgaccgctactggggggcgcagacccagcggtcgctgcagaacttcaagatcggcggc
gaacgcatgccggctcccctggtccgcgcgctgggcatccagaagaaggccgcggcgatg
gccaacatgtcgctcggcgtgctcgacgccaagatcggccaggccatgctcgacgcggcg
gaggaggtgatcgacggcacgctgatcgatcatttcccgctggtcgtctggcagaccggc
tccggcacccagaccaacatgaacgccaacgaggtgatctcgaaccgcgcgatcgagatc
ctgggcggcgagatgggctccaagaagccggtccatcccaacgaccacgtcaacatgggc
cagtcgtccaacgacagcttcccgaccgccatgcacatcgccgcggtcgagcaggtccac
cacgagctggtgccctcgctggagcacctgcattccgccctcgacgccaaggcgaaggat
ttcgccgagatcgtcaagatcggccgcacccatctccaggacgcgacgccgctgaccctc
ggccaggagttctcgggctacgcgacccaggtcgcctacggcatcgagcgggtcaaggcc
atgctgccgcgcctgctgcagctggcccagggcggcaccgcggtcggcaccggcctgaac
gccaagaagggcttcgccgaggatttcgcgaagaacgtcgagcagatcaccggcctgccc
ttcgtcaccgcgccgaacaagttcgaggcgctggccgcccacgacgcgctggtggagggc
tcgggcgcgctcaacaccgtcgcggtgtcgctgttcaagatcgccaacgacatccgcctg
ctggggtccggcccgcgctgcggcatcggcgagatcagcctgccggagaacgagcccggc
tcgtcgatcatgccgggcaaggtcaacccgacccagtccgaagccatgaccatggtctgc
gcccacgtcatgggcaaccacaccgcggtcaccttcgccggcgccaacggccatttcgag
ctgaacgtcttcaagccggtcatcatctacaacttcctgcagtcggtccgcctgctggcc
gacgcggcgcgcagcttcaccgacaactgcgtggtcgggatcgaggtcaacctggaccgc
gtgaccaagctgatgaacgagtcgctgatgctggtgaccgcgctcaacccgcatatcggc
tacgacaacgccgccaagatcgccaagaaggcgcacaaggaaggcaccaccttggtcgag
gccggcgtggcgctcggcctgctgacgccggagcagttcgaccagtgggtccgcccgctg
gacatgatcggcccgcgctga
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