Skermanella mucosa: JL100_020740
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Entry
JL100_020740 CDS
T07652
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00470
D-Amino acid metabolism
smuc00550
Peptidoglycan biosynthesis
smuc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JL100_020740 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JL100_020740 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smuc01011
]
JL100_020740 (murD)
Enzymes [BR:
smuc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
JL100_020740 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
smuc01011
]
Precursor biosynthesis
Amino acid ligase
JL100_020740 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
CbiA
KARI_N
Motif
Other DBs
NCBI-ProteinID:
UEM19500
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All DBs
Position
SKMUc:4448464..4449861
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AA seq
465 aa
AA seq
DB search
MIDLKHLRGKRYAVMGLAKSGLATARALMDAGVEILAWDDGEAGRAAASAAGIPLTDLNT
ADLSGVEALVLSPGIPHTFPKPNAVAARARDAGLPIVGDIELLYRAQPKASYVGITGTNG
KSTTTALIGHILALAGRRIQVGGNLGTPVLSFEPLGEDGVYVLEMSSYQLELVPSVGFNV
AILLNVTPDHLDRHGGMDGYVAAKRRIFQHPKRSHTAIVGVDDAHCRAVFEEMEHTVPCA
VVPISAERPTKGIFVLDGKLYDGGAEPVIDLAGIAALPGRHNWQNAAAAFAAARACGVPL
DTILAGLRSFPGLAHRQQLVAERDGVRFVNDSKATNADAAAKALVCYDPIYWIIGGQPKE
GGLDGLEPFMPRIRHAFLIGQATEQFAAWLHARDVAYTRCGTLETAVPAAAAMARDEALP
GATVLLSPACASWDQFRNFEHRGEVFAALVAALTSDVSVKKEVAG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacctcaagcatctccggggaaagcgctacgcggtcatgggcctcgccaagtcg
ggactggccacggcacgggcgctgatggacgccggcgtggagatcctggcctgggacgac
ggcgaggccggacgcgccgccgcctccgccgccggcatcccgctgaccgacctgaatacg
gccgacctttcaggggtcgaggcgctggtgctgtcgcccggcatcccgcacaccttcccg
aagcccaacgcggtcgcggcgcgggccagggatgccggcctgcccatcgtcggcgacatc
gagctgctgtaccgggcgcagcccaaggcgtcctatgtcggcatcaccgggaccaacggc
aaatccaccacgacggcgctgatcgggcacatcctggcgctcgccggccggaggatacag
gtcggcggcaatctcggcacgccggtcctgagcttcgagcccctgggcgaggacggcgtt
tacgtgcttgagatgtcctcgtaccagctggagctggtgccctccgtcgggttcaacgtc
gcgatcctgctcaacgtcacccccgaccacctggaccgccacggcggcatggacggctat
gtcgccgccaagcgccgcatcttccagcacccgaagcgctcgcacacggcgatcgtcggc
gtggacgacgcccattgccgggccgttttcgaggagatggagcacaccgtcccctgcgcc
gtggtccccatatcggcggagcggccgaccaaggggatctttgtcctggacggcaagctg
tacgacggcggcgcggagccggtgatcgacctcgccgggatcgccgccctgcccggccgg
cacaactggcagaacgccgcggcggccttcgcggcggcgcgcgcctgcggcgtgccgctc
gacaccatcctggcggggctgcgcagcttccccggcctggcgcaccgccagcagcttgtg
gcggagcgcgacggcgtccggttcgtcaacgacagcaaggcgacaaatgccgacgccgcg
gccaaggcgctggtctgctacgacccgatctactggatcatcggcggccagcccaaggag
ggcggcctggacgggctggagcccttcatgccgcgcatccgccatgccttcctgatcggg
caggcgacggagcaattcgccgcgtggctccacgcccgggacgtcgcctatacccggtgc
ggaaccctggaaaccgccgtgccggccgcggcggcgatggcgcgggacgaggcgctgccc
ggcgccacggtgctgctgtcgccggcctgcgcctcctgggaccagttcaggaacttcgag
catcgcggcgaggttttcgcggccctggtggcggccttgacgagtgacgtatcggtgaag
aaggaagtcgcgggatga
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