Skermanella mucosa: JL100_021820
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Entry
JL100_021820 CDS
T07652
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
smuc03110
]
JL100_021820 (clpB)
Chaperones and folding catalysts [BR:
smuc03110
]
Heat shock proteins
HSP100
JL100_021820 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
TniB
AAA_7
AAA_14
nSTAND3
IstB_IS21
AAA_28
bpMoxR
AAA_24
AAA_3
NBD_SMAX1
NACHT
AAA_19
T2SSE
Kbp-5
AAA_25
HEPN_Toprim_N
Motif
Other DBs
NCBI-ProteinID:
UEM19699
LinkDB
All DBs
Position
SKMUc:complement(4673635..4676298)
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AA seq
887 aa
AA seq
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MDFEKYTERSRGFVQAAQGLALRRGHQRLTAEHLLCTLLEDKEGLAANLIRSAGGDPVRA
LSAVEAELNKQPKVEGAGAGQIYLAPELARLFQTAEELATKAGDSFVTAERLLLALTMAE
GSPSSRILKDAGVTAQSLNQAINSIRKGRTADSASAEQGYDALKKYARDLTEAAREGKLD
PVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLRDKRLM
ALDLGAMVAGAKYRGEFEERLKAVLQEITAAAGEIIVFIDEMHTLVGAGKADGAMDASNM
LKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVFVSEPTVEDTISILRGLKEKYE
LHHGVRITDSAIVSAATLSHRYITDRFLPDKAIDLIDEAASRLRMEVDSKPEEIDELDRR
IIQLKIEREALKRESDQASRDRLEKLGAELDELERKSADMTSRWMAEKEQLTGAQKLKEQ
LDHARVELEQAQRNADWAKAGQLAYGAIPELERKLKAAEEVAGNRMLNEEVRESDIAGIV
SRWTGIPVDKMLTGEREKLLAMEGRLGTRVIGQDEAIVAVSNAVRRARAGLQDPNRPIGS
FLFLGPTGVGKTELTKALAEFLFDDETAMIRLDMSEYMEKHAVARMIGAPPGYVGYEEGG
ALTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSNL
GSEILANQPEGQDSSAVRDEVMEIVRASFRPEFLNRLDEILLFHRLSRSHMGGVVTIQLG
RLRRMLADRDIELAIDDKALAWLADAGYDPVYGARPLKRVIQRALQNPLATMLLEGRIAD
GQTVEVSAGEHGLTIDGVPADTQATAGAVSPGAATGRSGWSNRPTVH
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgagaaatacaccgaacggtcccgcggcttcgtgcaggcagcccaggggctg
gcgctgcggcgcggccaccagcggctcacggccgaacacctgctttgcaccttgctggaa
gacaaggaaggcctggcggccaacctgatccgctcggccggcggcgatccggtgcgggcg
ctttccgcggtcgaggccgagctgaacaagcagcccaaggtcgagggcgccggcgccggg
cagatctatctggcgcccgagctggcgcgcctcttccagaccgcggaggagctggcgacc
aaggccggcgacagcttcgtcaccgccgagcgcctgctgctggcattgaccatggccgag
ggcagcccttcgtcccgcatcctgaaggatgccggcgtcaccgcccagtcgctcaaccag
gcgatcaactcgatccgcaagggccgcaccgccgacagcgcgtcggccgaacagggctac
gacgcgctcaagaaatacgcccgcgacctgacggaggcggcgcgcgaggggaaactcgac
ccggtcatcggccgtgacgaggagatccgtcgcaccatccaggtcctggcccggcgcacc
aagaacaacccggtcctgatcggcgagcccggcgtcggcaagaccgccatcgtcgaaggg
ctggcccagcgcatcgtcaagggtgacgtgcccgaaggcctgcgcgacaagcgcctgatg
gcgctcgacctgggcgccatggtggcgggcgccaagtaccgcggcgagttcgaggagcgg
ctgaaggcggtcctgcaggagatcaccgcggcggccggcgagatcatcgtgttcatcgac
gagatgcataccctggtcggggccggcaaggccgatggcgcgatggacgcctccaacatg
ctgaagcccgcgctggcgcgcggcgagttgcattgcgtgggcgccacgacgctggacgag
taccgcaagcatgtggagaaggacccggcgctggcgcggcggttccagccggtcttcgtc
tccgagccgacggtcgaggacaccatctcgatcctgcgcggcctgaaggagaagtacgag
ctgcatcacggcgtgcggatcaccgacagcgcgatcgtctcggcggccaccctgtcgcac
cgctacatcaccgaccggttcctgccggacaaggcgatcgacctgatcgacgaggccgcg
tcgcggctgcgcatggaggtcgattcgaagccggaagagatcgacgagcttgatcgccgg
atcatccagctcaagatcgagcgcgaggccctgaagcgggagagcgaccaggcgtcgcgc
gaccggctggagaagctgggcgccgaactggacgagctggaacggaaatcggccgacatg
acctcgcgctggatggccgagaaggagcagctgaccggagcccagaagctgaaggagcaa
ctggaccacgcccgcgtcgagctggagcaggcccagcgcaatgcggactgggccaaggcc
ggccagctcgcctacggcgccattccggaactggaacggaagctgaaggccgccgaggaa
gtcgccgggaaccgcatgctgaacgaggaggtgcgcgagagcgacatcgccggcatcgtc
agccgctggaccggcatcccggtggacaagatgctgacgggcgagcgcgagaagctgctg
gcgatggaaggccgcctgggaacccgcgtgatcggccaggacgaggcgatcgtcgcggtc
tccaatgcggtccggcgtgcccgcgccggtcttcaggacccgaaccggccgatcggctcc
ttcctgttcctcggtccgaccggcgtcggcaagaccgagctgaccaaggcgctggccgag
ttcctgttcgacgacgagaccgccatgatccggctcgacatgtcggaatacatggagaag
cacgcggtcgcccgcatgatcggcgcgcctccgggctatgtcggttatgaggagggcggg
gccctgacggaggcggtccggcgccggccctatcaggtcatcctgttcgacgaggtcgag
aaggcgcaccccgacgtcttcaacgtgctgctccaggttctggacgacgggcgcctgacc
gacgggcaggggcgtacggtggacttccgcaacacgctgatcgtcatgacgtcgaacctc
ggttcggagatcctggcgaaccagccagaggggcaggacagctcggccgtgcgcgacgaa
gtgatggagatcgtccgggcgtcgttccggccggagttcctgaaccggctcgatgagatc
ctgctgttccatcggctgagccgcagccacatgggcggcgtcgtcacgatccagctcggc
cgtctgcggcggatgctggccgaccgcgacatcgagctggcgatcgacgacaaggcgctc
gcctggctggccgatgcgggctacgacccggtttacggtgcccggccgctgaagcgggtg
atccagcgggcgctccagaacccgctcgccacgatgctgctggaaggccgcatcgccgac
gggcagacggtcgaggtcagcgccggcgagcacggcttgacgatcgacggcgttccggcc
gacacccaggcgacggccggcgccgtttccccgggtgcggcaaccggccgctccggctgg
agcaaccggccgacggtccactga
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