Skermanella mucosa: JL100_022200
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Entry
JL100_022200 CDS
T07652
Name
(GenBank) mechanosensitive ion channel family protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_022200
Transporters [BR:
smuc02000
]
Other transporters
Pores ion channels [TC:
1
]
JL100_022200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
UEM19773
LinkDB
All DBs
Position
SKMUc:4765790..4767868
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AA seq
692 aa
AA seq
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MAQPVEGAPANQVDTLLRVFPDGLTPEQADAVLAVMGEAELRSALRPRLLAGPEGGKPPA
AEAAPLAAYANRIDAVAAAFPRVPGAIAEAFARPNGRDAAVSPARLGLSILFLFAVGTAA
LLAARRLLPESGPEAGGNALSRAARGLGIQAVRITAFLVGLLLGYAILRPSHPAAPAVLI
AVLQAAVTVSIADLVTRFLCAPDHPERRLLPVGDGGARPIHRTAVTAAVLTATTLGLADL
LGALGMAYDPLIALVLPISTAPFVYLLYRMWSSRPAMIHALRDHLGLEAQEVPTLALGLA
LATLYLVGLWLTAAAAALRLETGIGLRLLLSLFLSAAVPLLALMLRRPVVRFYRTPGEQT
DSRAALRLMRAVWVALLVLGVVATAFIWGFDPAAHVGLGGIVVRLLFDLGVVLLLGYVGW
ELLARSFDRVMTANTVGDQRTAQRVATLMPLVRKFLQVVLVAIVVMIVLSSMGIAIGPLL
AGAGVVGIAVGLGAQSTIADVLSGVFFLLEDAFHIGDYVEVGNLRGTVEGISLRSLKLRH
HRGAVHTLPFGQIKALTNLTRDWSLMRLEFRVAPDTDLAMVKRIIKDISKELQADPEMGP
SFIEPLKSQGVRRVEDDAVIIGIKYVTKPGEQFVIRREAYQRILKAFKANGIDLVGRGVV
VRVDDPHAGEHAVGFAAAQAIRDTRQDKASAD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagccggtggagggtgcgcccgccaaccaggtcgataccctgctgcgggtattc
cctgatgggctgacgccggagcaggcggacgccgtgctcgcagtgatgggcgaggcggaa
ctgcgtagcgcgcttcggccgcggcttctggccggcccggaagggggcaagccccctgcc
gcggaagccgcgcccttggcggcctatgcgaaccggatcgatgccgtggccgctgcgttt
ccgcgggtgcccggggcgatcgcggaagcctttgcccggccgaacgggcgggatgccgcc
gtgagccctgcgagacttggcctgtcgatcctgttcctgttcgccgtcgggactgcggct
ctgctggccgctcggcggctattgccggaatccggcccggaagccggcggcaatgccctg
tcccgcgcggcccgcggcctcggcattcaggcggtgcggatcacggcgttcctggtgggc
ctgctgctgggatacgcgatcctgcgcccctctcaccccgcggccccggcagtcctgatc
gcggtgctgcaagcggcggtcaccgtgtccatcgccgacctggtgacccggttcctgtgc
gcgccggaccatcctgaaagacggctgctgccggtgggcgacgggggtgcccgacccata
catcggactgcggtcaccgccgccgtgctcaccgcgacgacgctgggcctggcggacctg
ctcggcgccctgggtatggcctacgacccgttgatcgccctggttcttccgatcagcacg
gcaccgttcgtctacttgctgtacaggatgtggagcagccgacctgcgatgatccatgcg
cttcgcgaccatctcgggctggaggcccaggaagttccaaccctcgccttgggcctggcc
ctggcgaccctatacctggtcggcctttggcttaccgccgccgccgccgcactgcggctg
gaaaccggaataggcctgcgcctgctgctgagcctattcctgtcggcagccgtgccattg
ctcgcattgatgctcaggcgtcctgtcgtccggttctaccggacgcccggcgagcagacc
gacagcagggcggccctccggctgatgcgcgcggtatgggtcgccctgctggtgctgggc
gtggtggcgacggccttcatctggggcttcgacccggctgcccatgtcgggctgggcggc
atcgtcgtgcgcctgctgttcgacctgggcgtcgtcctgctgctcggttatgtcgggtgg
gaactgctcgcccggtcgtttgaccgcgtgatgaccgcgaacaccgtcggggaccagcgc
accgcccagcgcgtggcgaccttgatgccgctggtccgcaagttcctccaggtggtgctg
gtcgccatcgtcgtgatgatcgtcctgtcttccatgggtattgcgatcggcccgttgctg
gcgggagccggcgtggtcggcatcgcggtcgggctgggggcgcaatcgaccatcgctgac
gtgctgtccggggtcttcttcctgctggaggacgcgttccatatcggcgactatgtggag
gtcggcaatcttcgcggcactgtcgaggggatctcgctgcgctcgctcaagctgcgccat
caccggggcgcggtgcataccctgccgttcggccagatcaaggcgctgaccaacctgacg
cgcgattggtccctgatgcggctggagttccgcgttgcgccggataccgacctcgccatg
gtcaagcggatcatcaaggacatcagcaaggaactgcaagccgatccggagatgggcccc
agcttcatcgagcccctgaaatcccagggcgtgcgccgcgtggaggatgacgccgtgatc
atcggcatcaagtacgtcaccaagccgggcgagcagttcgtcatccggcgggaagcctat
cagcgcatcctcaaggccttcaaggcgaacgggatcgacctggttggccgtggcgtggtc
gtccgggtggacgatccccatgccggcgaacatgcggtcggattcgccgcggcgcaggcg
atccgcgatacgcggcaagacaaagccagtgctgactga
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