Skermanella mucosa: JL100_023975
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Entry
JL100_023975 CDS
T07652
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
smuc
Skermanella mucosa
Pathway
smuc02010
ABC transporters
smuc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JL100_023975
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL100_023975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_023975
Transporters [BR:
smuc02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
JL100_023975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
UEM24122
LinkDB
All DBs
Position
SKMUc:5145829..5147049
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AA seq
406 aa
AA seq
DB search
MLKQIMTGTALAALSVGFAAAANAQGAVSDGRIKIGVLNDRSGIYADVAGEGSAVAARMA
AEEFGNAIDGAPIEIVVADHQNKADIAANVTRQWIDREQVDVIADVPNSAAALAVQEITR
DKNRIFLMSGPGSSRLTGDACSPTGIHWTYDNHALAAGTARALTEEGKNTWYFITADYAF
GHSLEEETTAVVKELGGQVLGSVRHPLGNSDFSSFLLQAQGSGSQVIGLANAGNDTTNAI
KQANEFGITQAGQTLAGMLLFISDVNALGLNAAQGLVATTGFYWDMDEDTRAWSAKYQEK
TGSKPTMVQAGVYSSVKHYLKAVQAAKTDEAKAVVSKMHELPIQDMFAKNGKILSNGRMV
HDMYLARVKAPSESKGPWDYYEIVSTIPGDQAYLDAAASGCKIAQK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcagatcatgacgggtacggctctcgcggcactgtcggtcggcttcgccgcc
gcggcgaacgcgcagggagcggtctcggacggcaggatcaagatcggcgtcctgaacgac
cgctccggcatctatgccgacgtggcgggcgagggctcggccgtggccgcgcgcatggcg
gcggaggagttcggcaacgcgatcgacggcgcgccgatcgagatcgtggtcgccgaccat
cagaacaaggccgacatcgcggccaacgtcacccgccagtggatcgaccgcgaacaggta
gacgtgatcgccgacgtgcccaactcggccgcggcgctggcggtccaggagatcacccgc
gacaagaaccgcatcttcctgatgtccggcccgggcagctcgcgcctgaccggcgacgcc
tgctcgccgaccggcatccactggacctacgacaaccacgcgctggccgccggcaccgcg
cgcgcgctgaccgaggaaggcaagaacacctggtacttcatcaccgccgactacgccttc
ggccactcgctggaggaggagaccacggcggtggtcaaggagctgggcggccaggtgctt
ggctcggtgcgccacccgctgggcaactcggacttctcgtccttcctgctccaggcccag
ggctcgggctcccaggtgatcggcctcgccaacgcgggcaacgacaccaccaacgcgatc
aagcaggccaacgagttcggcatcacccaggcgggccagacgctggccggcatgctgctg
ttcatctcggacgtcaatgcgctcgggttgaacgccgcgcagggcctggtcgccacgacg
ggcttctactgggacatggacgaggacacacgcgcctggtcggccaagtaccaggagaag
acgggctcgaagccgaccatggtgcaggccggcgtctattcctcggtcaagcactacctg
aaggccgtccaggcggccaagaccgacgaggcgaaggccgtcgtctccaagatgcacgag
ctgccgatccaggacatgttcgccaagaacggcaagatcctgtccaacggccgcatggtc
cacgacatgtacctggcccgcgtcaaggcgccgtccgagagcaaggggccgtgggactat
tacgagatcgtgagcaccatccccggtgaccaggcctatctcgacgcggccgccagcggc
tgcaagatcgcccagaagtaa
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