Skermanella mucosa: JL100_024120
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Entry
JL100_024120 CDS
T07652
Name
(GenBank) dipeptide ABC transporter ATP-binding protein
KO
K10823
oligopeptide transport system ATP-binding protein
Organism
smuc
Skermanella mucosa
Pathway
smuc01501
beta-Lactam resistance
smuc02010
ABC transporters
smuc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JL100_024120
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL100_024120
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JL100_024120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_024120
Transporters [BR:
smuc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
JL100_024120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_16
AAA_22
AAA_29
AAA_13
Adeno_IVa2
AAA_5
NB-ARC
nSTAND3
AAA_23
Motif
Other DBs
NCBI-ProteinID:
UEM20132
LinkDB
All DBs
Position
SKMUc:complement(5170794..5171780)
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AA seq
328 aa
AA seq
DB search
MTAAPAPLLSVRDLRVSFPVPRGMFRGTDTLRAVDGVSFDLYPGETLGIVGESGCGKSTL
GRAVLKLIEPTGGTVAWLGEDISALPESRMRPHRRDMQVIFQDPLASLDPRMTVGDIIGE
PLDTFHPDLKRAARRARIEDMMARVGLLPEMINRYPHEFSGGQAQRIGIARAMILNPKLI
VCDEPVSALDVSIQAQIVNLLMRLQREFHLSLIFISHDLSVVRHISHRIMVLYLGKQAEL
ADRNTLYRDPRHPYTKALISAVPIPDPDRERAKRRIVLTGDLPSPLNPPSGCYFRTRCPR
AEAVCAEVAPGFDPVAPGHFAACHFRSG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgcgcccgctcccctcctgtcggtccgcgacctgcgggtctcctttccggtc
ccgcgcggcatgttccgcggtaccgataccctccgcgcggtggacggtgtcagcttcgac
ctctatcccggcgagacgctgggcatcgtgggcgaatccggctgcggcaagtcgaccctg
ggccgcgcagtgctgaagctgatcgagccgaccggcggcacggtcgcgtggctgggcgag
gacatctccgccctgccggaatcgcgcatgcgcccgcatcgccgggacatgcaggtgatc
tttcaggacccgctggcctcgctggacccgcgcatgaccgtcggcgacatcatcggcgaa
ccgctcgacaccttccatccggacctgaagcgcgccgcccgccgcgcccggatcgaggac
atgatggcccgcgtcggcctgctgccggagatgatcaaccgctatccgcacgagttcagc
ggcggccaggcccagcggatcggcatcgcccgggcgatgatcctgaaccccaagctgatc
gtctgcgacgagccggtctccgccctcgacgtgtcgatccaggcgcagatcgtgaacctg
ctgatgcggcttcagcgcgagttccacctgtcgctgatcttcatcagccacgacctgagc
gtggtgcgccacatcagccaccgcatcatggtgctgtacctgggcaagcaggcggaactg
gccgaccgcaacaccctttaccgcgacccgcgccacccctacaccaaggcgctgatctcg
gcggtgccgatccccgacccggaccgggagcgggccaaacgacgcatcgtcctgaccggc
gatctgccgtcccccttgaacccgcccagcggctgctatttccgcacccgctgcccgcgc
gccgaggcggtctgcgcggaggtggcgcccggcttcgacccggtggcgccggggcacttc
gcggcgtgccatttcaggagtggctga
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