Skermanella mucosa: JL100_024350
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Entry
JL100_024350 CDS
T07652
Name
(GenBank) PAS domain S-box protein
KO
K13587
two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:
2.7.13.3
]
Organism
smuc
Skermanella mucosa
Pathway
smuc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JL100_024350
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smuc01001
]
JL100_024350
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
smuc02022
]
JL100_024350
Enzymes [BR:
smuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
JL100_024350
Protein kinases [BR:
smuc01001
]
Histidine kinases
Cell cycle family [OT]
JL100_024350
Two-component system [BR:
smuc02022
]
Cell cycle family
CckA-CtrA/CpdR (cell cycle control)
JL100_024350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS_4
Response_reg
PAS_8
PAS
PAS_9
HisKA
PAS_7
Motif
Other DBs
NCBI-ProteinID:
UEM20175
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All DBs
Position
SKMUc:complement(5243851..5246475)
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AA seq
874 aa
AA seq
DB search
MQEQVSSSALDLAGPRLSAGEKPSRDGVLTRTAFVGAGGLAAIGAAGLGLAAGGIVTDPV
ALSGGMFVLLAAGGAVLARRISSLQASGRGQADVERAMLASAFQAGAVGRMISGRDGRVV
QVNAAFRHLAGAAGKDPLESLRLRFDQAPDMASRFRGLVEAALRGDGASAELSLGPGRSW
LLVRVMPLADADPAGVGPGSGEKLVKWVVEDITERKRAEQQLRDEQANLSDFMGSAPIGF
YSVDQDGRFLYANATLAEWLGCTPADLVGGSVRLHDVLAEPPPSPSAAHSPFAGAESGGD
VTMKGLGGRRFQASVVQTVVASGDGRSLRTRSVVRDLTPEREWREALHLSEQRFQSFFEE
APIGIALIDEGGRLAECNQAFLTMVGRPLRSIMGCPLAELFSAGERSTVVARLEQIKSGS
DMIAPFEVNLRALGRDKKMAQLYARRMAGGSGNGSANGSGSGDAGAGSGSGMILHFIDLT
EQKSLEAQFAQSQKMQAIGQLAGGVAHDFNNLLTAMIGFCDLLLLRHKPGDQSFSDIMQI
KQNANRAANLVRQLLAFSRQQTLQPRVLNITDVLAELSNLLRRLIGENIELKMTHGRDLG
LIKVDQGQLEQVIINLAVNARDAMSGGGRLTIQTSNVSTDGPTRREHEEMPPGEYVAIEV
SDTGIGIPKENLARIFEPFFSTKEVGSGTGLGLSTVYGIVRQTGGFIFVDSAPGEGAKFT
IYLPRHQSAKAAGATAEAESEARERSAGDLTGTGTILLVEDEDAVRVFSARALRNKGYQV
LEARSGEAALSLLNSESNRVDLLVSDVVMPHMDGPTLIRHVRDKRPEMKVIFISGYTEDK
FRDQIDAGEHIHFLPKPFSLKQLAGKVKEVLRDG
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggagcaggtttcttcatccgccctcgacctcgcggggccgaggctgtccgccggg
gagaagccgtcgcgcgacggcgtccttacccggaccgcgttcgtcggggcgggcgggctg
gcggcgatcggcgccgcggggctgggcttggcggcagggggcatcgtgaccgatcccgtg
gccctgagcggcggcatgttcgtcctgctggccgccggcggcgccgtgctggcgaggcgg
atctcgtcgctccaggcgtcgggccgggggcaggccgacgtcgagcgggcgatgctggcc
agcgccttccaggccggtgccgtggggcgcatgatctccggccgtgacggccgcgtcgtg
caggtcaacgccgccttccgccatctggccggcgcggccggcaaggacccgctcgaatcg
ctccggctccgtttcgatcaggctccggacatggcctcccgcttccgcgggctggtcgag
gcggcgctgcgcggcgacggggcctccgccgaattgtccctcgggccgggccgctcctgg
ctcctggtccgggtgatgccgctggccgatgcggacccggccggggtcggccccggctct
ggggagaagctggtcaagtgggtggtggaggacatcaccgaacgcaagcgggccgaacag
cagttgcgtgacgaacaggcgaacctgtccgatttcatgggcagtgcgccgatcggcttc
tattcggtcgaccaggacggccgcttcctgtacgccaacgccaccctggccgaatggctc
ggctgcacgccggccgacctggtcggcggttcggtcaggctgcacgatgtcctggccgaa
ccgccgccaagcccgtcggcggcccacagcccgttcgccggtgccgagagcggcggcgac
gtgaccatgaagggtctcggggggcggcggttccaggcctcggtcgtccagaccgtggtg
gcgtcgggcgatggccggtcgctgcggacccgctccgtggtgcgggacctgacgcccgag
cgggaatggcgcgaggcgctgcacctttcggaacagcgcttccagagcttcttcgaggag
gcgccgatcggcatcgccctgatcgacgagggcggcaggctggcggaatgcaaccaggct
ttcctgaccatggtcggccgtccgctgcgcagcatcatgggatgccccctggccgaactg
ttcagcgcgggcgagcggtccacggtggtcgcccgcctggagcagatcaagtccggttcc
gatatgatcgctcctttcgaggtgaacctgcgcgccctgggccgggacaagaagatggcg
cagctctatgcccgccggatggccggcgggtcgggcaatggatcggccaatggatcaggg
agcggggatgccggggcgggttccggctccggaatgatcctgcacttcatcgacctgacc
gagcagaagagcctggaggcgcagttcgcccagagccagaagatgcaggcgatcggccag
ctcgcgggcggcgtggcccacgacttcaacaacctcctgacggcgatgatcggcttctgc
gacctgctgctgctccggcacaagccgggcgaccagtcgttcagcgacatcatgcagatc
aagcagaacgccaacagggcggccaacctggtgcgccagctgctggccttctcgcgccag
cagacgctgcagccgcgcgtgctcaatatcaccgacgtgctggccgagctgtcgaacctg
ctgcgccggctgatcggcgagaacatcgagctgaagatgacccatggccgcgacctgggc
ctgatcaaggtcgaccagggccagctcgaacaggtcatcatcaatctcgccgtcaacgcc
cgcgacgccatgtcgggtggcggacggctgaccatacagaccagcaacgtctcgaccgac
ggcccgacccgccgcgagcacgaggagatgcctcccggcgagtatgtcgcgatcgaggtg
tcggacaccggtatcgggattcccaaggaaaacctcgcccgcatcttcgagccgttcttc
tccaccaaggaggtcggttccggcaccggcctcggcctgtccaccgtgtacggcatcgtg
cgccagaccggcggcttcatcttcgtcgacagcgccccgggggagggcgccaagttcacc
atatacctgccgcgccaccagtcggccaaggccgccggcgccacggccgaagccgagagc
gaggcccgggagcggtcggccggggacttgaccgggaccgggaccatcctgctggtcgag
gacgaggacgccgtgcgcgtgttcagcgcccgggcgctccgcaacaagggttatcaggtg
ctcgaggcccgcagcggcgaagcggcgctcagcctgctgaactccgagtcgaaccgtgtc
gacctgctggtcagcgacgtggtgatgccccacatggacggacccaccctgatccggcac
gtccgcgacaaacggccggagatgaaggtgatcttcatctccggctataccgaggacaag
ttccgcgaccagatcgacgccggcgagcatatccatttcctgcccaagccgttcagcctc
aagcagctcgccggcaaggtgaaggaggtcctgcgcgacgggtga
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