Skermanella mucosa: JL100_024950
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Entry
JL100_024950 CDS
T07652
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
smuc
Skermanella mucosa
Pathway
smuc03030
DNA replication
smuc03430
Mismatch repair
smuc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JL100_024950
03430 Mismatch repair
JL100_024950
03440 Homologous recombination
JL100_024950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smuc03032
]
JL100_024950
03400 DNA repair and recombination proteins [BR:
smuc03400
]
JL100_024950
Enzymes [BR:
smuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JL100_024950
DNA replication proteins [BR:
smuc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JL100_024950
DNA repair and recombination proteins [BR:
smuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JL100_024950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_16
AAA_5
AAA_30
AAA_14
AAA_18
AAA_19
AAA_assoc_2
TsaE
AAA_24
DUF815
Mg_chelatase
AAA_2
nSTAND3
Glyco_tranf_2_5
SRP54
Motif
Other DBs
NCBI-ProteinID:
UEM20290
LinkDB
All DBs
Position
SKMUc:5369361..5371250
Genome browser
AA seq
629 aa
AA seq
DB search
MTDQTLPPLTSAPADGASEAGGKAYRVLARKYRPRDFSELVGQEALVRTLTNAIRSGRLA
HAFMLTGVRGVGKTTTARIIARALNCTGPDGTGGPTITPCGVCDNCRSITADRHVDVMEM
DAASRTGVDDIREIIDGVRYGPVSARYKVYIIDEVHMLTKNAFNALLKTLEEPPEHVKFI
FATTEIRKVPVTVLSRCQRFDLRRIDSQTLVKHFNRVAEAEGVTVEPDAMALIARAADGS
ARDGLSLLDQAIALGGERLTAVQVRDMLGLADRARVVDLFESAMTGQPRDALDILSDLHR
SGADPVVVLQDLLDFTHFLTRFKVVPETATDPGTPETERVRGGELSGKLGMPALTRAWQI
LLKGLGEVQSAPVPFDAAEMVLVRLAYSADLPNPADLIRQLQGGAASGGPAGGNGGGGAG
GGGGGARANGPALAVAHSAPPRVQSGSAQPAAETAVTAQAAPEQAPSEQAGEAEPLPEPK
TFREVVELFGEMREGSLYGQLYSSVHCVRCEPGRLEIRPKDRAMAELSGRVGKLLTEWTG
RRWMVTISGAPGEPTLGEQDRNAKTRAREEAARHPVVRAVLDIFPGSEISEVRDLTEPEP
TSDGALAEDALETDFYEEAPSDLDDIGEF
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgaccagaccctcccccccctgacctccgcgccggccgacggcgcgtccgaagcc
ggcggcaaggcctatcgggtcctggcgcgcaagtaccgtccgcgcgacttctccgaactg
gtgggccaggaggctctggtccgcacgctgaccaacgccatccgctcgggccgcctggcc
catgccttcatgctgaccggcgtgcgcggggtgggcaagaccacgaccgcccgcatcatc
gcccgcgcgctgaactgcaccggcccggacgggaccggtgggccgaccatcacgccctgc
ggcgtctgcgacaattgccgcagcatcaccgccgaccggcacgtggacgtgatggaaatg
gacgccgccagccggaccggcgtggacgacatccgcgagatcatcgacggcgtgcgctac
ggcccggtgtcggcgcgctacaaggtctacatcatcgacgaagtccacatgctcaccaag
aacgccttcaacgccctgttgaagacgcttgaggagccgcccgagcatgtgaaattcatc
ttcgctacgacggagatccgcaaggttccggtcaccgtgctgtcgcgctgccagcgattc
gacctgcgccggatcgacagccagacgctggtgaagcatttcaaccgcgtcgccgaggcg
gaaggcgtgacggtcgagccggacgccatggcgctgatcgcgcgggccgccgacggctcg
gcgcgcgacgggctcagcctgctcgaccaggcgatcgcgctgggcggggaacggctgacc
gcggtccaggtgcgcgacatgctgggcctggccgaccgcgcccgggtggtcgacctgttc
gagtcggcgatgaccgggcagccgcgcgacgcgctggacatcctgtccgacctgcaccgc
agcggcgccgacccggtcgtggtgctccaggacctgctcgatttcacccatttcctgacc
cgcttcaaggtggtgccggagaccgcgaccgacccggggacgccggagacggaacgggtc
cgtggcggcgaactgtcgggcaagctgggcatgcccgcgctgacccgggcctggcagatc
ctgctgaagggcctgggcgaggtgcagagcgcgccggtgccgttcgacgcggccgagatg
gtgctggtgcgcctggcctattccgccgacctgcccaacccggccgacctgatccgccag
ctccagggcggcgcagcctcgggcgggccggccggcggcaacggcggcggaggggccggt
ggagggggcggcggtgcccgggcaaacgggccggcgctggcggtcgcccactcggccccg
ccccgcgtccagtccggttcggcccagccggcggcggaaactgccgtgacggcgcaggcc
gcccccgagcaggccccttcggaacaggccggagaggcggaaccgctgccggaaccgaag
accttccgcgaggtggtcgagttgttcggcgagatgcgtgagggctcgctgtacggccag
ctctacagcagcgtccactgcgtccggtgcgagccgggccggctggagatccgcccgaag
gaccgcgccatggcggagctttccggccgggtcggcaagctgctgacggaatggaccggc
cggcgctggatggtcacgatctccggcgcccccggcgagccgaccctgggcgagcaggac
cgcaacgccaagacccgggcgcgcgaggaggcggcacggcatccggtggtgcgcgcggtg
ctcgacatcttccccggttccgagatatccgaagtgcgcgatttgacggaaccggaaccc
acctccgacggagcgcttgcggaagacgcccttgagaccgatttctacgaggaagccccg
tccgacctggacgacataggagaattttaa
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