Skermanella mucosa: JL100_025200
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Entry
JL100_025200 CDS
T07652
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JL100_025200 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smuc01007
]
JL100_025200 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smuc03016
]
JL100_025200 (pheT)
Enzymes [BR:
smuc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
JL100_025200 (pheT)
Amino acid related enzymes [BR:
smuc01007
]
Aminoacyl-tRNA synthetase
Class II (U)
JL100_025200 (pheT)
Transfer RNA biogenesis [BR:
smuc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JL100_025200 (pheT)
Prokaryotic type
JL100_025200 (pheT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
UEM20338
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All DBs
Position
SKMUc:complement(5424814..5427219)
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AA seq
801 aa
AA seq
DB search
MKLTFSWLKAHLDTGADVETISSKLTSLGLEVEEVVDRAKGLEAFRVAYVVSAEKHPDAD
KLRVCMVDTGSETVQVVCGAPNARTGMKGVFAPTGSVIPATGVELKKGVIRGVESNGMLC
SEREMGLSDAHEGIIDLPGDAPVGAPFATVVGLDDPLIDVSLTPDRADCAGVRGIARDLA
AAGLGELRPLETTPVPGTFASPIGVTLDFGPGDVSACPMFVGRLIRGVRNGPSPRWLQDR
LLSIGLRPISALVDITNLLTHDIARPLHVFDAGKLRGGLTVRPARAGETLLALNGKEYTL
DEGMTVIADDSGVVSLGAVMGGESTGVTETTTDVFLEAALFDPVRTARTGRKLSIDSDAR
YRFERGVDPAFVIPGVEIATRLILEACGGAASELVVAGSEPSWRRELTLRPGRILELGGV
DVPVPEQVRILEALGFGVTGRSDGVMAVLPPSWRADIHGEADLVEEVLRVHGYDHIPAIP
LERTAAITRPALNTRQKRTAMARRVLAVRGLSEAVTWSFMSSAHVDLFGGVTDGLRLLNP
ISADLDVMRPSILPNLIQAVGRNADRGYPDVGLFEVGPVFRDPSPQGQDTVAAGVRSGTL
VPRQWAEKQRPVDAFDVKADALAVLEAAGAPTGNLQVTADAPAWYHPGRSGVLRLGPTVL
ARFGEVHPEVLDALGAKGPVAAFEVMLDAVPVPKKKGGTAKPLLRLSLFQPIQRDFAFLV
DASVEAEKLVRAAKGADKALITEVSVFDVYQGQGIEPGTKSLAITVTIQPTGKPLTEQEI
DAIGTKIVAAVSKATGGTLRG
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttaccttttcctggctgaaggcccacctggacaccggggccgacgtcgagacg
atctcttcgaagctcacatcactcggcctggaggtcgaggaggtcgtggaccgcgccaag
gggctcgaagccttccgcgtggcctacgtggtctccgccgagaagcaccccgacgccgac
aagctgcgcgtctgcatggtcgataccgggtccgaaacggtccaggtcgtctgcggcgcg
cccaatgcccgcacgggcatgaagggcgttttcgcgccgaccggctcggtcatcccggcg
accggggtggagctgaagaagggcgtcatccgcggcgtcgagtccaacgggatgctctgt
tcggagcgtgaaatggggctgtcggatgcccacgagggcatcatcgacctgcccggcgac
gcccccgtgggtgcccccttcgcgacggtggtcggcctggacgatccgctgatcgacgtc
tcgctgacgccggaccgggccgattgcgccggtgtgcgcggcatcgcccgcgacctcgcc
gcggccggcctgggcgagttgaggccgctggagaccacgccggtgccgggcaccttcgcc
agcccgatcggcgtcacgctcgatttcgggcccggggacgtgtcggcctgcccgatgttc
gtcggccgcctgatccgcggcgtgaggaacgggccgagtccgcgctggctgcaggatcgg
ctcctgtccatcgggctgcggccgatctcggccctggtcgacatcaccaacctgctgacc
catgacatcgcccggccgctgcacgtgttcgacgcgggcaagctgcggggcgggctgacg
gtccggccggcccgcgcgggcgagacgctgctggccctgaacggcaaggaatacaccctc
gacgagggcatgacggtgatcgccgacgacagcggcgtggtcagcctgggtgccgtcatg
ggcggcgagagcaccggcgtcaccgagacgacgaccgacgtgttcctggaggcggcgctg
ttcgacccggtgcgcacggcgcggaccggccgcaagctgtcgatcgacagcgacgcccgc
taccggttcgagcgcggcgtcgatcccgccttcgtgatccccggcgtcgagatcgcgacg
cggctgatcctggaggcctgcggcggtgctgccagcgaactggtggtcgccgggtccgag
ccgtcctggcggcgcgagctgacgctgcgtcccggccgcatcctggagttgggcggggtg
gacgttccggttccggaacaggtgcgcatcctggaggcactgggcttcggcgtgacgggg
cggagcgacggcgtcatggccgtgctgccgccgagctggcgcgccgacatccatggcgag
gcggatctggtcgaggaagtgctgcgcgtccacggctacgaccacatcccggcgatcccg
ctggagcggacggcggcgatcacccgccccgcgctgaacaccaggcagaagcgcacggcc
atggcccggcgcgtgctggcggtgcgcggcctgtcggaggcggtcacctggtccttcatg
tcgtcggcccatgtggacctgttcggcggcgtgacggacgggctgcgcctgctgaacccg
atcagcgccgacttggacgtcatgcgtccctcgatcctgcccaacctgatccaggccgtc
ggccgcaatgccgaccggggctatcccgatgtcggcctgttcgaggtcgggccggtcttc
cgcgacccgtcgccgcaggggcaggacacggtcgccgccggcgtccggtccggcaccctg
gtgccgcgccagtgggcggagaagcagcgcccggtggacgccttcgacgtcaaggccgac
gccctggcggtgctggaagcggcgggcgccccgacgggcaacctgcaggtcacggccgac
gctcctgcctggtaccatcccgggcgctccggcgtcctgcggctcggcccgacggtgctc
gcccggttcggcgaggtgcatccggaagtgctggacgccctgggcgccaaggggccggtc
gcggcgttcgaggtgatgctcgacgcggtgccggtgccgaagaagaagggcgggacggcc
aagcccctgctgcggctctccctgttccagccgatccagcgcgacttcgcgttcctggtc
gacgcctcggtcgaggccgaaaagctggtgcgggcggccaagggggcggacaaggcgctg
atcaccgaggtatccgtgttcgacgtctaccagggtcaggggatcgaaccgggcaccaag
tcgctcgccatcacggtcaccatccagcccaccggcaagccgctgacggagcaggagatc
gacgcgatcggcaccaagatcgtcgccgcggtatcgaaggcgaccggcggcactttgcgc
ggttga
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