Skermanella mucosa: JL100_025775
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Entry
JL100_025775 CDS
T07652
Name
(GenBank) ribulose-bisphosphate carboxylase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00630
Glyoxylate and dicarboxylate metabolism
smuc00710
Carbon fixation by Calvin cycle
smuc01100
Metabolic pathways
smuc01110
Biosynthesis of secondary metabolites
smuc01120
Microbial metabolism in diverse environments
smuc01200
Carbon metabolism
Module
smuc_M00165
Reductive pentose phosphate cycle (Calvin cycle)
smuc_M00612
Anoxygenic photosynthesis in purple bacteria
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JL100_025775
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
JL100_025775
Enzymes [BR:
smuc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
JL100_025775
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
UEM20448
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All DBs
Position
SKMUc:5539269..5540735
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AA seq
488 aa
AA seq
DB search
MEVVADRVITDKKARYKPGVLKYKQMGYWDPDYEVKDTDILAAFRITPQDGVDPVEAAAA
VAGESSTATWTVVWTDRLTDCENYRAKAYRVDPIPGAPDQYMAYIAYDLDLFEEGSIANL
TASIIGNVFGFKPLKGLRLEDMRIPTAYLKTFQGPATGIIAERERLNNYGRPLLGATMKP
KLGLSGRNYGRVVYEALKGGLDFTKDDENINSQPFMHWRDRYLYCMEGVNKAIAETGEIK
GTYLNVTAATMEDMYERAEFAKELGSVIIMIDLVIGYTAIQSMAKWARRNDMILHLHRAG
HSTYTRQKSHGVSFRVIAKWMRMAGVDHIHAGTVVGKLEGDPSVIRGIYDTCRETHVPKR
LEHGILFDQPWASLKKMMPVASGGIHAGQMHQLLTYLGDDVVLQFGGGTIGHPGGIQAGA
VANRVALETMVKARNEGRDIWNEGPEILARAAKWCQPLRAALDTWKDVTFDYASTDSVDY
VPTPTPAF
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggtcgcggatcgcgtcatcaccgacaagaaggcccgctacaagccgggtgtc
ctcaagtacaaacagatgggttactgggatcccgactacgaggtcaaggataccgacatc
ctcgccgcgttccgcatcacgccccaggacggcgtcgatccggtggaagccgccgcggcc
gtcgccggcgagtcatccaccgcgacctggaccgtggtctggaccgaccgcctgaccgac
tgcgagaactaccgcgccaaggcctaccgggtcgatccgatcccgggcgctcccgaccag
tacatggcctacatcgcctacgacctcgacctgttcgaggaaggctcgatcgccaacctg
accgcctcgatcatcggcaacgtcttcggcttcaagcccctgaagggcctgcgcctcgag
gacatgcgcatcccgaccgcctacctgaagaccttccagggaccggcgaccggcatcatc
gccgagcgcgagcggctgaacaactatggccgccccctgctgggcgccaccatgaagccg
aagctgggcctgtcgggccgcaactacggccgcgtcgtctacgaggcgctgaagggcggc
ctggacttcaccaaggacgacgagaacatcaattcccaacccttcatgcactggcgcgac
cgctatctctactgcatggaaggcgtcaacaaggcgatcgccgagaccggcgagatcaag
ggcacctacctgaacgtcaccgccgccaccatggaggacatgtacgagcgggcggagttc
gcgaaggagctgggcagcgtcatcatcatgatcgacctggtgatcggctacaccgccatc
cagtccatggcgaagtgggcccgcaggaacgacatgatccttcacctgcaccgcgccgga
cactccacatatacccggcagaagtcccacggcgtgtcgttccgggtgatcgccaagtgg
atgcgcatggccggcgtcgaccatatccacgccggaaccgtcgtcggcaagctggagggc
gaccccagcgtgatccgcggcatctacgacacctgccgcgagacccatgtgccgaagcgg
ctggagcacggcatcctgttcgaccagccctgggccagcctgaagaagatgatgccggtg
gcgtccggcggcattcatgccggccagatgcaccagctcctgacctacctgggcgacgac
gtggtgctccagttcggcggcgggaccatcggccaccccggcggcatccaggccggggcc
gtcgccaaccgcgtggcgctggagaccatggtcaaggcccgcaacgaagggcgcgacatc
tggaacgaagggccggaaatcctggccagggcggccaaatggtgccagccgctgcgcgcg
gcgctggacacctggaaggacgtgacgttcgactacgcctcgaccgacagcgtcgactac
gtcccgaccccgacgcccgccttctag
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