Skermanella mucosa: JL100_026770
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Entry
JL100_026770 CDS
T07652
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
smuc
Skermanella mucosa
Pathway
smuc03030
DNA replication
smuc03410
Base excision repair
smuc03420
Nucleotide excision repair
smuc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JL100_026770 (polA)
03410 Base excision repair
JL100_026770 (polA)
03420 Nucleotide excision repair
JL100_026770 (polA)
03440 Homologous recombination
JL100_026770 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smuc03032
]
JL100_026770 (polA)
03400 DNA repair and recombination proteins [BR:
smuc03400
]
JL100_026770 (polA)
Enzymes [BR:
smuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JL100_026770 (polA)
DNA replication proteins [BR:
smuc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JL100_026770 (polA)
DNA repair and recombination proteins [BR:
smuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JL100_026770 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JL100_026770 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
TraI_hel_assoc_N
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
UEM20641
LinkDB
All DBs
Position
SKMUc:5751657..5754518
Genome browser
AA seq
953 aa
AA seq
DB search
MTDTAQTDSVPTETAAKQADGLYLVDGSGFIFRAYHAIPPLTRADGTPVNAVMGFTNMLM
KLLADHHAEAVAVVFDSKRLNFRNEFYADYKAHRPEPPEELKPQFGIIREAVEAFCVPSI
ELEGYEADDLIATYARLAREQGRQVTIVSSDKDLMQLVSDGVAMLDPMKNKPIGPEEVFE
KFGVTPDKVVDVQALAGDPVDNVPGVPGIGVKTAAQLIGEYGDLEQLLERAGEIKQPKRR
QALIDNAELARISKRLVRLDDQAPVPVPLDDLKVREPDHEKLLGFLRQQGFRSIITRVEN
EIRADGKLVDGASAPAGTAALAGGSTAPEAKPRARFDGKGSYELVQTAEALDRWIAAAYA
AGTVAVDTETDSLSACSTRLVGVSMAVEQGAACYIPVGHVGPGGAPAEGSLDLSPSDAPP
QLPIAEVVAKLKPLLEDPAVLKVGHNLKFDIQVFGSHGIRLAPIDDTMLISYVLETGLHG
HGMDELSKLHCDYTPITYDQVTGTGKSRVTFDRVPLDKATEYAAEDADVTLRLHHALKPR
LVPERLTTLYETIERPLVPVIADMEACGILVDRDVLKELSGDLASRLAELETEIHRLAGH
PFNVGSPKQLGDVLFGEMGLQGGKKGKTGAYSTDSATLEPLAEQGHDIVQKVLDWRQFSK
LKSTYTDSLQQQIDAKTGRVHTSFSLAITNTGRLSSNDPNLQNIPIRTEEGRKIRRAFIA
KPGHVLLSVDYSQIELRLVAEMAGIEALKHAFRENIDIHAMTASQVFGVPLDQMTGEIRR
KAKAINFGIIYGISGFGLGRQLGIPAGEANAFIKRYLERFSELAAFMEQTKEFCRKNGYV
TTLFGRRCHIQGITERNPARRQFAERQAINAPIQGTAADIIKRAMVRIPAALEAAGLTGR
MLLQVHDELVFEVPEAEAAETSDTVRRVMEGAASLGVPLVAEAGTGHSWADAH
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgcccagaccgattccgtcccgacggaaaccgccgccaaacaagccgat
ggcctctacctggtggatggctccggattcatcttccgcgcctaccacgccattccgccg
ctgacccgcgccgacggcaccccggtcaacgcggtgatgggcttcaccaacatgctgatg
aagctgctggcggaccatcatgccgaggcggtggcggtggtcttcgacagcaagcggctg
aacttccggaacgagttctacgccgactacaaggcccaccggcccgagccgccggaggag
ctgaagccccagttcggcatcatccgcgaggcggtcgaggccttctgcgtgccgtcgatc
gagctggaggggtacgaggccgacgacctgatcgcgacatacgcgcgcctcgcccgcgag
cagggacggcaggtcacgatcgtctcgtccgacaaggacctgatgcagctggtcagcgac
ggcgtcgccatgctggacccgatgaagaacaagccgatcgggccggaagaggtcttcgag
aaattcggcgtgacgccggacaaggtggtggacgtgcaggcgctggccggcgacccggtg
gacaacgtgccgggcgttcccggcatcggcgtcaagaccgcggcccagctgatcggcgag
tacggcgacctggaacagttgctggagcgggccggcgagatcaagcagcccaagcgccgc
caggccctgatcgacaatgcggagctggcacggatctccaagcggctggtccggctggac
gaccaggcaccggtgccggtgccgctcgacgacctgaaggtgcgcgagcccgaccacgag
aagctgctgggcttcctgcggcagcagggcttccggtcgatcatcacccgggtcgagaac
gagatccgcgccgacggcaagctggtggacggcgcctccgccccggcgggcacggcggcc
ctggcgggcggatcgaccgcgccggaggctaagccccgggcccggttcgacggcaaggga
agttacgaactggtccagaccgccgaggcgctggaccgctggatcgcggccgcctatgcc
gccggaacggtcgcggtcgataccgaaaccgactcgctgagcgcgtgcagcacccggctg
gtcggcgtctcgatggcggtcgaacagggggcggcctgctatatcccggtcggccatgtc
ggcccggggggagcgccggcggaaggatcgctcgacctcagcccgtccgacgcgccgccg
cagctgccgatcgccgaggtggtggcgaagctgaagccgcttctggaagacccggccgtg
ctgaaggtcgggcataacctgaaattcgacatccaggtgttcggcagccacggcatccgg
ctcgccccgatcgatgacaccatgttgatcagctacgtgctggagacggggctgcacggc
catggcatggacgagctgtcgaagctccattgcgactatacgccgatcacctatgaccag
gtgaccggcaccggcaagtcgcgggtcaccttcgaccgggtgccgctggacaaggcgacc
gagtacgcggcggaggacgccgacgtgacgctccgcctccaccacgcgctgaagccccgg
ctggtgccggagcggctgacaacgctctacgagacgatcgagcggccgctggtccccgtc
atcgccgacatggaggcctgcggcatcctggtggaccgcgacgtgctgaaggagctgtcg
ggcgatctggcgtccaggctggccgagctggagacggagatccaccggctggccggccat
cccttcaatgtcggctcgcccaagcagctgggcgacgtgctgttcggcgagatgggattg
cagggcggcaagaagggcaagacgggcgcctattccaccgacagcgccacgctggagccg
ctggccgagcagggccacgacatcgtgcagaaagtgctggactggcgccagttctccaaa
ctgaagagcacctacaccgacagcctgcagcagcagatcgatgccaagaccggccgggtc
cacacctcgttctcgctggcgatcaccaacaccggccggctgtcgtccaacgatcccaac
ctgcagaacatcccgatccgcaccgaggagggccgcaagatccgccgcgccttcatcgcc
aagccgggccatgtgctgctgtcggtggactattcccagatcgagctgcggctggtcgcc
gagatggccgggatcgaggcgctgaagcacgccttccgcgagaacatcgacatccatgcc
atgaccgcgtcccaggtgttcggcgtgccgctggaccagatgaccggggaaatccggcgc
aaggccaaggcgatcaatttcggcatcatctacggcatcagcggcttcggcctgggccgc
cagctcggcatcccggcgggggaggcaaacgccttcatcaagagatacctggagcgcttc
tcggaactggccgccttcatggagcagacgaaggagttctgccggaagaacggctacgtc
acgaccctgttcggccgccgctgccatatccagggcatcaccgagcgcaacccggcgcgc
cgccagttcgccgagcgccaggcgatcaacgcgccgatccaggggaccgcggccgacatc
atcaagcgcgccatggtccgcatacccgcggcgctggaagccgccggcctgacgggccgc
atgctgctgcaggtccacgacgaactggtgttcgaggtcccggaagccgaggccgccgag
acctccgacaccgtgcgccgcgtcatggaaggcgccgcgagcctcggcgtgccgctggtc
gccgaggccggcacgggacacagctgggccgacgcgcactga
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