Skermanella mucosa: JL100_027235
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Entry
JL100_027235 CDS
T07652
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00630
Glyoxylate and dicarboxylate metabolism
smuc00680
Methane metabolism
smuc01100
Metabolic pathways
smuc01120
Microbial metabolism in diverse environments
smuc01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JL100_027235
09102 Energy metabolism
00680 Methane metabolism
JL100_027235
Enzymes [BR:
smuc01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
JL100_027235
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Motif
Pfam:
Molybdopterin
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
UEM20729
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Position
SKMUc:complement(5868758..5871349)
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AA seq
863 aa
AA seq
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MPSLGATYGRGAATLAQWDLANSDFVLVMGSNMAENHPIAFRFVMQAKEKGATIVHADPR
FTRTSAMCDIHAPLRAGSDIAFLGGMIRYILENDLWFKEYALEYTNIAMIISPDYQDPEQ
LDGVFSGWDEGKKSYVLDTWQYEGMKVPSSLAEHHATTTESFNDTSKTTSEGPPPHDRTL
QHPNCVYQIMKRHYARYTPEMVERVTGCPASTFLKVCEAITRNSGRDRTGAICYAVGWTH
HSTGVQMIRGAGIIQALLGNVGRPGGGVLALRGHTSIQGSTDIPTLYDMLPGYLQQPHAY
RPHKDLKQFLETEQTPTGWWHNFPKYMVSLLKAWYGDHAAPSNGFGYEWLPKIVGDHSQL
PQTLAMRDGVIRGMFFLGQNPAIGGSNSKMVQAGMAELDWMVVRDCAETDTASFWYQGHL
VRDGDLKPEDIKTEIFLMPGSLAGEKDGTFTNTHRLLQWHDKVVDGPGDSQSELWFIYHL
GLRLKALYADSDKERDLPIRNLTWDYPEMGLDRDPSAEAVLKEINGYTWVERKQLTGIND
IKDDGSTACGCWIYCGVFPEEGDNRSRSRRADGPQGPGTHLGWGFAWPENRRTLCNRASA
DPEGKPWSEKKRLVWWDAEKESWTGDDSIDFPKTKAPGYDPDWSKHPVGMEALDGRSPFI
MIADGKASLFAPSGMKDGPLPTHYEPLESPVRNPLYGRQSNPVAKRWEEADNQLAEPGDP
RFPHAFTTYRLTEHHSGGTPTRSVPVTAELQPEGFAEIPTELARDLGIGNTDWIVISTLR
GEIETRALVTDRMQPFRLAEGRVVHQVGMPWHFGWKGYATGDIANVLTAVVGDPNTSMHE
NKALVCNVRRGRLMRHDGSRGED
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
gtgcccagtctgggtgccacctatggcaggggagcggcgacgctcgcccagtgggatctc
gccaattccgacttcgtcctggtgatggggtcgaacatggccgagaaccatccgatcgcc
ttccgcttcgtgatgcaggcgaaggagaagggcgccacgatcgttcatgccgacccgcgc
ttcacgcggacctcggccatgtgcgacatccacgcgccgctgcgcgcgggatcggacatc
gcgttcctgggcggcatgatccgctacatcctggagaacgacctgtggttcaaggaatac
gcccttgaatacacgaacatcgcgatgatcatctcgcccgactaccaggacccggagcag
ctggacggcgtcttctccggctgggacgaggggaagaagagctacgtgctcgacacttgg
cagtacgagggcatgaaggtgccgtcgtcgctggccgagcaccacgcgaccacgaccgag
tccttcaacgacacctcaaagaccaccagcgaagggccgccgccgcacgaccgcacgctc
cagcatcccaactgcgtctaccagatcatgaagcggcactacgcccgctacacgccggag
atggtcgagcgggtgaccggctgcccggcctcgaccttcctgaaggtctgcgaggcgatc
acccggaattccggccgggacaggaccggggcgatctgctacgcggtcggctggacgcac
cacagcaccggcgtgcagatgatccgcggcgccgggatcatccaggcgctgctgggcaat
gtcgggcggccgggcggcggtgtgctggcgctgcgcgggcacaccagcatccagggcagc
accgacatcccgaccctgtacgacatgctgcccggatatctccagcagccccacgcctac
cggccgcacaaggacttgaagcagttcctggagaccgagcagacgccgaccggctggtgg
cacaatttccccaaatacatggtcagcctgctcaaggcctggtacggcgaccatgcggcc
ccgtccaacggcttcggctacgagtggctgcccaagatcgtcggcgaccacagccagctt
ccccagacgctggcgatgcgcgacggggtgatccgcggcatgttcttcctgggccagaac
ccggcgatcggcggcagcaattccaagatggtgcaggccggcatggccgaactggactgg
atggtggtacgcgactgcgccgagaccgacaccgcctccttctggtaccaaggtcatctg
gtgcgcgacggcgacctgaagccggaggacatcaagaccgagatcttcctgatgccgggc
tcgctggccggcgagaaggacggcaccttcaccaacacccaccgtctgctgcagtggcat
gacaaggtggtggacggcccgggcgacagccagtcggagctttggttcatctatcacctg
ggcctccgcctgaaggcgctgtacgccgacagcgacaaggagcgggacctgccgatccgg
aacctgacctgggactatccggagatggggctggaccgcgacccgtccgccgaggccgtg
ctgaaggagatcaacggctatacctgggtcgagcgcaagcagctgaccggcatcaacgac
atcaaggacgacggctccaccgcctgcggttgctggatctattgcggcgtcttccctgag
gaaggcgacaaccggtcccgctcgcgccgggccgacgggccgcagggaccgggaacccac
ctgggctggggcttcgcctggcccgagaaccgccgcaccctgtgcaaccgggcctccgcc
gaccccgagggcaagccctggtcggagaagaagcggctggtctggtgggacgcggagaag
gaaagctggaccggcgacgattcgatcgacttccccaagaccaaggcgcccggatacgac
ccggactggagcaagcacccggtcggcatggaagcgctggacggccgcagccccttcatc
atgatcgccgacggcaaggcgtcgctgttcgccccgtcgggaatgaaggacggtccgctg
ccgacccattacgagccgctggaaagcccggtgcgcaatcccctgtacgggcggcagtcc
aacccggtcgccaagcgctgggaagaggccgacaaccagctggcggagcccggcgatccg
cgtttcccccacgccttcaccacgtaccggctgaccgagcaccattccggcggcacgccg
acccgctccgtcccggtcacggcggagcttcagccggaagggttcgccgagatcccgacc
gagctggcgcgggacctcggcatcgggaacaccgactggatcgtgatctcgacgctgcgc
ggcgagatcgagacgcgggcgctggtgaccgaccggatgcagccgttccgcctcgcggag
gggcgggtcgtccaccaggtcggcatgccctggcatttcggctggaaaggctacgccacc
ggcgacatcgccaacgtgctgaccgccgtggtcggcgaccccaacaccagcatgcacgag
aacaaggcgctggtctgcaatgtcaggcgcggacgcctgatgagacatgacggttcccga
ggagaagactga
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