Skermanella mucosa: JL100_028120
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Entry
JL100_028120 CDS
T07652
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
smuc
Skermanella mucosa
Pathway
smuc00010
Glycolysis / Gluconeogenesis
smuc00020
Citrate cycle (TCA cycle)
smuc00620
Pyruvate metabolism
smuc00650
Butanoate metabolism
smuc00720
Other carbon fixation pathways
smuc01100
Metabolic pathways
smuc01110
Biosynthesis of secondary metabolites
smuc01120
Microbial metabolism in diverse environments
smuc01200
Carbon metabolism
smuc01210
2-Oxocarboxylic acid metabolism
Module
smuc_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
JL100_028120 (nifJ)
00020 Citrate cycle (TCA cycle)
JL100_028120 (nifJ)
00620 Pyruvate metabolism
JL100_028120 (nifJ)
00650 Butanoate metabolism
JL100_028120 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
JL100_028120 (nifJ)
Enzymes [BR:
smuc01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
JL100_028120 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_21
TPP_enzyme_C
Fer4_10
Fer4
Fer4_6
Fer4_16
Fer4_8
Fer4_9
Fer4_2
Fer4_17
Transketolase_C
Fer4_18
Fer4_4
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
UEM20887
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All DBs
Position
SKMUc:complement(6042912..6046505)
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AA seq
1197 aa
AA seq
DB search
MPDDGSVAIARSSGEGRTQAGEIIDGNQAAASVAYRASEVIAIYPITPASPMGELADEWA
AKGRPNLWGQVPKVVEMQSEGGAAGAIHGALQAGALATSFTASQGLLLMIPNLYKIAGEL
TPFVLHVAARTLATHALSIFGDHSDVMACRQTGFAMLASSTVQEAQDMALVAHAATLESR
IPFIHFFDGFRTSHELNRVAPLDDDQIRGLLDGEGIDALRRRALSPDHPVIRGTAQNADV
FFQAREACNPYYEACPGIVRGVLERFAALTGRRYAPFDYDGAPDAERVVVAMGSGARTVR
ETALWLAARGHKVGALTVRLYRPFDTAGFLAALPRTVRAIAVLDRTKEPGSVGEPLFLDV
VAALADAPEEFPARPLVVGGRYGLSSKEFTPGMAAAVFEELTKPQPKRRFTVGITDDVSH
SSLAFDPDLDIEPPDTMRAVFFGLGSDGTVGANKNSLKIIAEHTGAHAQGYFVYDSRKAG
ATTVSHLRFGRHPVNAPWLIRKAGFVACHHAPLLERAEVLELAAPGAQVLLNLPGTPEEV
WARLPREVQELAIERSLRLHAIDASRVAREAGLGRRINTIMQTCFFALSEVMPRDEAIAE
IRAAIEKTYGRRSEEMVRRNNAAVDEALAHLVPVPVPARPTGLPRPPAVPGDAPDFVQRV
TALMLAGHGDRLPVSAFPVDGTWPLGTTRYEKRMIATEIPIWNAELCIQCNKCAMVCPHA
AIRVKAAAPADLADAPEGFVILDYRGDEFQGAKYLLQVAPDDCTGCTLCVEVCPAKDKGN
PRRKALEMRPADAVRPAARPLWDYFRQVPEAPRERVPHNVKQVQLFEPLFEFSGACAGCG
ETPYVKLLTQLFGDRAVIANATGCSSIYGGNLPTTPYAANADGRGPAWANSLFEDNAEFG
FGIRVGIDQLADQARALLRGLGPDLPEGLVQGLLAEGPAGEGALKARREAVLELRRHLAG
IAGPAARRLELLADYLARKSVWIVGGDGWAYDIGYGGLDHVLSSDRDVNVLVLDTEVYSN
TGGQQSKATPLGASAKFAMAGRAVGKKDLGMLAMAYGHVYVAHVAFGAKDAQTVKAFMEA
ESYPGPSLVIAYSPCVAHGYDLCHQLDQQKLAVDSGHWPLFRYDPRRLAAGQPPLQLDSG
PPKARLADFMANETRFGVVRRDDPERFRRLLKAAETENRLRLDLYRHMAGFVEPAAD
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgacgggtccgtcgccatcgcacgcagctctggggagggccggacgcaggcc
ggcgagatcatcgacggcaaccaggccgcggcctccgtcgcctaccgggccagcgaggtc
atcgcgatctaccccataacccccgcctcgcccatgggcgaattggcggacgagtgggcg
gccaaggggcggcccaacctgtggggacaggttcccaaggtggtcgagatgcagtcggag
ggcggcgccgccggggcgatccacggcgcgctccaggccggcgcgctggcgaccagcttc
acggcgtcccagggcctgctgctgatgattcccaacctctacaagatcgcgggcgagctg
acgcccttcgtgctccacgtggcggcgcgcaccctggcgacccatgccctgtcgatcttc
ggcgaccattccgacgtcatggcctgccgccagaccggcttcgccatgctggcgtcctcc
accgtgcaggaggcgcaggacatggccctggtcgcccatgccgcgaccctggagtcccgt
atccccttcatccatttcttcgacgggttccgcacctcccacgagctgaaccgggtggcc
ccgctggacgacgaccagatccggggcctgctggacggggaggggatcgacgccctgcgc
cggcgggcgctgagccccgaccaccccgtgatccgcggcaccgcacagaacgcggatgtc
ttcttccaggcgcgcgaggcctgcaatccttactacgaagcctgccccggcatcgtccgc
ggcgtcctggagcgcttcgcggcgctgaccggccgccgctacgccccgttcgactatgac
ggcgcgccggacgccgagcgggtcgtggtcgccatggggtcgggcgcccggacggtgagg
gaaaccgcgctctggctggcggcgcgcggccacaaggtcggcgcgctgaccgtgcggctc
taccggcccttcgacaccgccggcttcctggcggcactgccgaggacggtccgggcgatc
gcggtgctggaccggaccaaggagccgggctccgtcggcgaacccctgttcctcgacgtg
gtcgcggcgctggcggacgccccggaggagttcccggcccgtcccctggtggtcggcggg
cgctacgggttgtcgtccaaggagttcacgcccggcatggccgcggcggtgttcgaggaa
ctgaccaagccgcagccgaaacggcgcttcaccgtcggcatcaccgacgacgtgagccat
tcctcgctggcgttcgaccccgatctcgacatcgagccgcccgacaccatgcgggcggtg
ttcttcggcctgggctcggacgggacggtcggcgccaacaagaattcgctgaagatcatc
gcggagcataccggcgcccatgcccagggctatttcgtctatgacagccgcaaggccggc
gccaccaccgtctcccacctgcgtttcggccggcacccggtcaacgctccctggctgatc
cgcaaggccggcttcgtcgcctgccaccacgctcccctgctggagcgggcggaggtcctg
gaactggccgctccgggcgcccaggtgctgctgaaccttcccggcaccccggaggaagtc
tgggcccggctgccgcgcgaggtccaggagctggcgatcgaacggtccttgcggctccac
gcgatcgacgccagccgggtcgcccgggaggccgggctggggcgccgaatcaacactatc
atgcagacctgcttcttcgccctgtccgaggtgatgccgcgcgacgaggcgatcgccgag
atccgcgccgcgatcgaaaagacctacggccgccgcagcgaggagatggtccggcgcaac
aatgccgccgtggacgaggcgctggcccatctggtgccggtcccggttcccgcccggccc
accggccttccccggccgccggcggttcccggcgacgcgccggacttcgtccaaagggtc
acggcgctgatgctcgccgggcatggcgaccggctgccggtcagcgccttcccggtggac
gggacttggccgctgggcaccacgcgctacgagaagcgcatgatcgcgaccgagatcccg
atctggaacgccgagctgtgcatccagtgcaacaagtgcgcgatggtctgcccgcacgcc
gcgatccgggtcaaggccgccgcacccgccgacctggcggacgctcccgaaggtttcgtg
atactcgactatcgcggcgacgagttccagggggcgaagtacctgctccaggtggctccc
gacgactgcaccggctgcaccctgtgcgtcgaggtctgcccggccaaggacaagggcaat
ccccgccgcaaggcgctggagatgcggcccgccgacgcggtgcgcccggcggcccggccg
ctctgggactatttccggcaggtgccggaagccccacgcgagcgggtgccccacaacgtc
aagcaggtgcagctgttcgagccgctgttcgagttctccggcgcctgcgccggctgcggc
gagacgccctatgtcaagctgctgacccagctcttcggcgaccgcgccgtcatcgccaac
gccaccggctgctcgtccatctacggcggtaacctgccgaccacgccctatgcggccaac
gccgacgggcgcgggccggcctgggccaactccctgttcgaggacaatgccgagttcggc
ttcggcatccgggtcgggatcgaccagctggccgatcaggccagggctctgctgcgcggg
ctggggcctgaccttcccgaggggctcgtgcagggcctgctggcggaagggcccgccggg
gaaggcgcgctcaaggcccggcgggaggctgtcctggaactgcgccggcatctggccggg
atcgccggccccgccgcccggcggctggagcttctggccgactatctcgcgcgcaagtcg
gtctggatcgtcggcggcgacggctgggcctacgacatcggctatggcggcctggaccac
gtgctgtcttccgaccgggacgtgaacgtgctggtgctggacacggaggtctattccaac
accggcggccagcagtcgaaggcgacgccgctcggcgcgtcggccaagttcgccatggcc
ggccgggcggtcggcaagaaggacctgggcatgctggcgatggcctacggccacgtctat
gtcgcccatgtcgcgttcggcgccaaggacgcgcagacggtcaaggccttcatggaggcc
gaatcctatcccggcccgtcgctggtcatcgcctacagcccctgcgtcgcccacggctac
gacctgtgccaccagctcgaccagcagaagctggcggtcgacagcggacactggccgctg
ttccgctacgacccgcgccggctcgcggccgggcagccgccgctccaactggacagcggc
ccgcccaaggcgcggctggccgacttcatggccaacgaaacccgcttcggcgtcgtccgg
cgcgacgaccccgagcggttccggcggctgctcaaggcggcagagaccgagaacaggctg
cgcctggacctctaccgccatatggcgggattcgtcgagccggcggccgactga
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