Skermanella mucosa: JL100_028235
Help
Entry
JL100_028235 CDS
T07652
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
JL100_028235 (ltrA)
Enzymes [BR:
smuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
JL100_028235 (ltrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
GIIM
Motif
Other DBs
NCBI-ProteinID:
UEM20909
LinkDB
All DBs
Position
SKMUc:6077592..6079115
Genome browser
AA seq
507 aa
AA seq
DB search
MTHAPKRSDPSIVPVKSANADAEPVEGRGGAEGNASPPHTGRAQDRAPVLSGLERIRQAA
RERKEERFTTLLTHVDTDLLRFAYRALKRDAAPGVDGMTWREYAEGLEERLADLKDRVHS
GRYRAHPSRRHFIPKPDGRMRPLGIAALEDKIVQRALVEVLNAIYEEDFLGFSYGFRPGR
GQHDALDALAVAIGECRVNWILDADIRAFFDSIDHMWIMRFLEHRIGDARVLRLIRKWLT
VGVVDETGKRQPATAGSPQGAVASPLLANVYLHYVYDLWTRQWRHRHATGTMVMVRYADD
TVVGFEHRSDAERFLADLRERLARFALELNADKTRLIEFGRQATADRAKRGAGKPETFDF
LGFTHICGRSRRGGFLLRRQTRRQRKQAKLKEIKEELRRRWHQGIPEQGRWLGQVMRGFY
AYFAVPTNYRALANLRYHVGVLWMRALRRRSQKDKTPWDKLTRLADCWLPRPRIIHPWPG
NRFRVKHPRWEPDALIGHVRFCAGGAR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcacgcgccgaagaggtcagacccatccatagtacctgtgaagtcggcgaacgcg
gacgcggagccggtggagggaaggggtggggccgaggggaatgcgtctccgccgcacacg
ggccgggctcaggaccgggcacccgtgctctcggggctggagcgcatacgtcaagcggca
cgggagcgaaaggaggagcggttcaccacccttctgacgcacgtggataccgacctgctg
cgctttgcctatcgggcattgaagcgggacgcggctccgggtgtggacggaatgacgtgg
cgggagtacgcggaggggctggaggaacggctggcggacctgaaggaccgcgtgcattcc
ggccgctaccgggcgcacccgtcacgccggcatttcattcccaagccggacggccggatg
cggccgctcgggatcgcggcactggaggacaagatcgtccagcgggcgctggtggaggtg
ctgaacgccatctacgaggaagacttcctcggcttctcctacggcttccggccgggacgg
gggcagcacgacgcgctcgacgcgttggcggtggcgatcggcgagtgccgggtgaactgg
atcctggatgcggacatccgggcgttcttcgacagcatcgaccacatgtggatcatgcgg
ttcctggaacaccggatcggcgatgcccgcgtcctgcggctgatccgcaagtggctgacg
gtaggcgtggtggacgagacggggaaacggcagccggcgacggccggcagcccgcaaggg
gcggtggcatcgccactgctggccaacgtctatctccactatgtctacgacctgtggacc
cggcagtggcgccatcgccacgcgaccgggaccatggtcatggtgcgctacgccgacgac
accgtcgtcgggttcgagcaccggtcggacgccgagcggttcctcgcggacctgcgggag
cgcctggcgcggttcgccctggaactgaacgccgacaagacccgcctgatcgagttcggc
cggcaggcaactgccgaccgggccaagcgcggcgcgggcaaaccggagaccttcgacttc
ctgggcttcacccacatctgtgggcggtcccggcgtggcggcttcctgctgcgacgccag
acccggcgccagcgcaagcaggccaagctcaaggaaatcaaggaggaactccggcggcgc
tggcaccagggcatcccggagcaaggccggtggttgggacaggtgatgcgcggcttctac
gcctacttcgccgtcccgaccaactaccgggcccttgccaacctgcgctaccatgtcggc
gtcctgtggatgagggcgctgcgtcggcgcagccagaaggacaagacaccgtgggacaaa
ctcacgcgccttgccgactgctggctaccacggccgcgcatcatccatccctggcccgga
aaccgcttccgcgtcaaacacccaaggtgggagccggatgccttaatcgggcacgtccgg
ttctgtgcggggggcgcccggtaa
DBGET
integrated database retrieval system
