Skermanella mucosa: JL100_029140
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Entry
JL100_029140 CDS
T07652
Name
(GenBank) Lrp/AsnC ligand binding domain-containing protein
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smuc03000
]
JL100_029140
03036 Chromosome and associated proteins [BR:
smuc03036
]
JL100_029140
Transcription factors [BR:
smuc03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
JL100_029140
Chromosome and associated proteins [BR:
smuc03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
JL100_029140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR
HTH_20
MarR_2
AsnC_trans_reg_3
HTH_27
HxlR
HTH_Crp_2
GntR
HTH_PafC
LexA_DNA_bind
HTH_CodY
NirdL-like_HTH
TrmB
E3_UFM1_ligase
Motif
Other DBs
NCBI-ProteinID:
UEM21079
LinkDB
All DBs
Position
SKMUc:complement(6252500..6252961)
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AA seq
153 aa
AA seq
DB search
MDRIDRAILRELQQNGRISVVELAGRVNLTKTPCSERLRRLEAAGVIRRYRAELDPVALE
ADHVVLVQVVLRGTTADELERFNEAVRRVPEIQSCHMIAGDFDYLLKVRTRDIQHYRRLL
GDTISRLPHVQQTHTYVVMETVKDDMTLPVPGG
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atggaccggatcgaccgcgcgatcctgcgcgagcttcagcagaacggccggatatcggtc
gtggaactggccgggcgggtcaacctgaccaagacgccctgttcggaacggctgaggcgg
ctggaggcggccggcgtgatccggcgctaccgcgccgagctggacccggtggcgctggag
gcggaccacgtggtgctggtccaggtggtgctgcgcggcacgaccgcggacgagctggag
cgcttcaacgaggcggtccgccgggtgccggagatccagtcctgccacatgatcgccggc
gacttcgactatctgctgaaggtgcggacgcgcgacatccagcattaccgccggctgctg
ggcgacacgatctcgcgcctgccccatgtccagcagacgcacacctatgtggtgatggag
acggtgaaggacgacatgaccttgccggtgccggggggctga
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integrated database retrieval system
