Skermanella mucosa: JL100_029590
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Entry
JL100_029590 CDS
T07652
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
smuc
Skermanella mucosa
Pathway
smuc03030
DNA replication
smuc03430
Mismatch repair
smuc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JL100_029590 (holA)
03430 Mismatch repair
JL100_029590 (holA)
03440 Homologous recombination
JL100_029590 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smuc03032
]
JL100_029590 (holA)
03400 DNA repair and recombination proteins [BR:
smuc03400
]
JL100_029590 (holA)
Enzymes [BR:
smuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JL100_029590 (holA)
DNA replication proteins [BR:
smuc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JL100_029590 (holA)
DNA repair and recombination proteins [BR:
smuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JL100_029590 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FUSC
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
UEM21167
LinkDB
All DBs
Position
SKMUc:6348362..6349393
Genome browser
AA seq
343 aa
AA seq
DB search
MKIPAGRIEGFVRRPDPNVRAVLFYGPDGGLVRERADTVSRGVVEDQHDPFRVVDMLGSA
VAKDPARLADEVAAMSLTGGRRLIRIRDADDGVTGAFASLFESLPGGDSMVVVEAGDLSK
GSKLRALFENAPAGAPIPCYVEDESALADTIAGMLAAHKLTVSADARDFLAANLVGDRMI
ARGEVEKLVTYMGEGGRRVELEDAQACIGDSGALEMDAPSWAAGDGDFAGVDRALRRLFA
EGMSPVPILRSAQRHFQRLQLVVAQVEKGDSVERAVATLRPPLFFKVKNQFTGQVRRWTP
AALRQGLDRLTDAEADCKRTNMPDETICARAFFQLAVLARSRR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcccggccggccggatcgaggggttcgtccgccgtcccgaccccaacgtccgg
gcggtgctgttctacggccccgacggcggcttggtgcgcgagcgggccgacaccgtctcc
cgcggcgtggtcgaggaccagcacgacccgttccgcgtggtggacatgctcggctccgcc
gttgccaaggacccggcgcggctggccgacgaggtggccgccatgtccctgaccggcggc
cggcgcctgatccgcatccgcgatgccgacgacggcgtgaccggcgccttcgcctccctg
ttcgagtcgctgcccggcggcgacagcatggtggtggtcgaggccggcgacctgtccaag
ggatcgaagctgcgggcattgttcgagaacgccccggccggcgccccgatcccctgctac
gtggaggacgaatcggcgctggccgacaccatcgccggcatgctggcggcccacaagctg
acggtcagcgccgacgcccgcgacttcctggcggccaacctggtgggcgaccgcatgatc
gcccgcggcgaggtcgagaagctggtgacctacatgggcgagggcggccgccgggtcgag
ctggaggacgcccaggcctgcatcggcgacagcggcgcgctggagatggacgcgccctcc
tgggccgccggcgacggcgacttcgccggcgtggaccgcgcgctccgccgcctgttcgcg
gagggcatgagcccggtgccgatcctccgctccgcccagcggcatttccagcggctccag
ctggtcgtggcccaggtggagaagggcgactcggtggagcgcgccgtcgccaccctgcgc
ccgccgctgttcttcaaggtcaagaaccagttcaccggacaggtccggcgctggaccccg
gcggcgctccgccaggggctggaccgcctgaccgacgccgaggccgactgcaagcgcacc
aacatgcccgacgagaccatctgcgcccgcgccttcttccagctcgccgtcctggcccgc
agccgccgctga
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