Skermanella mucosa: JL100_029735
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Entry
JL100_029735 CDS
T07652
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
smuc
Skermanella mucosa
Pathway
smuc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JL100_029735 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smuc03400
]
JL100_029735 (mutS)
DNA repair and recombination proteins [BR:
smuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
JL100_029735 (mutS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_29
bL9m_N
Motif
Other DBs
NCBI-ProteinID:
UEM24160
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Position
SKMUc:complement(6378498..6381131)
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AA seq
877 aa
AA seq
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MMAQYLEIKQAHPGCLLFYRMGDFYELFFDDAVAAAATLDITLTRRGQHNGEDIPMCGVP
VHSHENYLLRLIRHGHRVAICEQMEDPAEAKKRGGKSVVKRAVVRVVTPGTLTEDSLLDA
RANNFLGALAETAGGTGLAWLDLSTGELTLQPVSRDGLAAALQRLDPQELVLPERLVQQP
DLFELFGEWKSRLTVQPNSRFDSENGRRRLLDLFGVGTLDAFGSFSRAEVAAAGALVDYV
ELTQKGRVPRLNPPRQLAQGAVMEIDQATRRNLELTRTLIGERRGSLLAAIDRTVTGPGA
RLLAAWLSAPSTDRAEISGRLDMVEFFLAEDRVRAEARALLRQCPDMERALSRLALGRGG
PRDLACVRDGLVRAVEMRRALAGAGMTPGPAGIETAAAGLGEHSTLIDRLERALAPDLPL
LARDGGFIARGFALHLDDLVTLRDESRRLIAAMQARYADLSGVSGLKIRHNNVLGYYIEV
TPTHADKLMAGKAAETFIHRQTLASAVRFTTVELGELERKISEAADKAVAVELALFDELV
GDVTARAGRIGEAARALALLDVTTALAELAEERRYCRPVVDDSLEFEIRGGRHPVVEAAL
TASDGSQFVANDCDLGPDDRLWLLTGPNMAGKSTFLRQNALIAVMAQIGSFVPAERCRIG
MVDRLFSRVGAADDLARGRSTFMVEMVETAAILNQAGPRALVILDEIGRGTATFDGLSIA
WACVEHLHEATRCRALFATHYHELTTLAAKLPRLSCHTMRIKEWQGEVVFLHEVAAGSAD
RSYGIHVAKLAGLPEAVIARAEQVLEILEKGEHGVSVARLADDLPLFSVALRRKEPEPAA
PAGPSPIEQALKAINPDELTPKAALDELYRLRSMLGG
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgcagtacctggagatcaagcaggcccatccgggctgcctgctgttctacagg
atgggcgacttctacgagctgttcttcgacgacgcggtcgccgcggcggcgacgctcgac
atcaccctgacccggcgcggccagcataacggcgaggacatcccgatgtgcggggtgccg
gtccacagccacgagaactacctgctgcgcctgatccgccacggccatcgggtcgcgatc
tgcgagcagatggaggacccggcggaggccaagaagcgcggcggcaagtcggtggtcaag
cgggcggtggtgcgggtcgtcacccccggcacgctgaccgaggacagcctgctggacgcc
cgcgccaacaatttcctgggcgcgctggccgagacggcgggcggcaccgggctcgcctgg
ctggacctgtccaccggcgagctgacgctccagccggtgagccgggacggtctggccgcc
gccctgcagcgactcgatccgcaggagctggtgctgcccgagcggctggtccagcagccc
gacctgttcgagctgttcggcgagtggaagagccggctgacggtccagccgaacagccgg
ttcgacagcgagaacggccggcggcggctgctcgacctgttcggcgtcggcacgctggac
gccttcggcagcttcagccgggcggaggtcgcggcggccggcgccctggtggactatgtc
gagctgacccagaagggccgggtgccgcggctgaacccgccgcgccagctggcccagggc
gccgtcatggaaatcgaccaggcgacccgccggaacctggagctgacccggaccctgatc
ggcgagcgccggggcagcctgctggccgcgatcgaccgcaccgtgaccgggcccggcgcc
cgcctgctggcggcgtggctgtcggccccctcgaccgacagggccgagatctccggccgg
ctcgacatggtggagttcttcctggcggaggatcgggtccgggcggaggcgcgcgcgctg
ctgcgccaatgccccgacatggagcgggcgctgtcgcggctggccctgggccggggcggc
ccgcgcgacctcgcctgcgtccgcgacggccttgtgcgcgccgtggagatgcgccgcgcg
ctggccggtgccggcatgacgccgggacccgccgggatcgaaacggcggcggcgggcctg
ggcgagcattccaccctgatcgaccggctggagcgcgcgctggcgcccgacctgccgctg
ctggcccgcgacggcgggttcatcgcgcgcggcttcgcgctccacctggacgacctggtg
accctgcgggacgagagccgccggctgatcgccgcgatgcaggcgcgctatgccgacctg
tccggcgtgtccgggctgaagatacggcacaacaacgtgctgggctattacatcgaggtg
acgccgacccacgccgacaagctgatggccggcaaggcggcggagaccttcatccaccga
cagacgctggcgagcgccgtccgcttcaccacggtcgagctgggcgagctggagcggaag
atctcggaggccgcggacaaggcggtggcggtcgagctggcgctgttcgacgagctggtc
ggcgacgtcaccgcccgggccggccggatcggcgaggccgcccgcgcgctggccctgctg
gacgtgacgacggcgctggccgagctggcggaggagcggcgctattgccggccggtcgtg
gacgacagcctggagtttgagatcaggggcggccgccacccggtggtcgaggcggcgctg
accgcgtcggacggctcgcagttcgtcgccaacgactgcgacctggggcctgacgaccgg
ctgtggctgctgaccggccccaacatggcgggcaaatccaccttcctgcgccagaacgcg
ctgatcgccgtgatggcccagatcggcagcttcgttccggccgagcggtgccggatcggc
atggtggaccggctgttcagccgcgtgggagcggccgacgacctggcgcgcgggcgctcc
accttcatggtcgagatggtcgagacggcggcgatcctgaaccaggcggggccgcgcgcg
ctggtgatcctggacgagatcggccggggaacggcgaccttcgacgggctgtcgatcgcc
tgggcctgcgtcgagcacctgcacgaggcgacccgctgccgggcgctgttcgcgacccac
tatcacgagctgacgaccctggccgccaagctgccccgactgtcctgccacaccatgcgg
atcaaggagtggcagggggaggtggtcttcctgcacgaggtcgcggcgggctcggccgac
cgcagctacggcatccacgtggccaagctggccgggctgccggaggcggtgatcgcgcgg
gccgagcaggtgctggagatcctggagaagggcgagcacggagtcagcgtcgcccggctg
gccgacgacctgccgctgttcagcgtcgccctgcggcggaaggagcctgaaccggcggca
ccggccgggccgtcgccgatcgagcaggcgctgaaggcgatcaacccggacgagctgacg
cccaaggcggcgctggacgagctttaccggctgcggtcgatgctgggcgggtga
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