Skermanella mucosa: JL100_030855
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Entry
JL100_030855 CDS
T07652
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
smuc
Skermanella mucosa
Pathway
smuc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL100_030855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_030855
Transporters [BR:
smuc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JL100_030855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UEM24612
LinkDB
All DBs
Position
pSM-1:185306..186817
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AA seq
503 aa
AA seq
DB search
MTRRTVLSVACAMLMASAALPAAAQTGGDAITVVLPEQPGNLEPCGSIMTNVGQILNQNV
TEPLTVIDPENGTPRPKLATSWERVDDTTWRFRLRDGVKFHDGADFDAEAAAFSIRRMTS
GAFTCNNIAKFGSAKLTVTPVDKSTLEIRTETAEPILPALLSVAMMVSPKTPADRAVNDP
VGTGPYELETFTPQTVVLEPFDGYWGETPDIAKATYVWRAESSLRAAMVQTGEAQLTPAI
AIQDATDPETDFSYLNSETTAIRIDTGKAPLDDVRVRKALNLAIDWQGMAELFGDDVLRA
SQMVVPGINGHNASVEPWTYDPDRAAKLLEEARADGVPVGTEIKLIGRNGIYPNGNEALE
AMMTMWEAVGFNIDLTMLDVADWTRYLQKPFPQERGPTLLQIMHDNNKGDAAFTIPIFYH
SSGQYATFEDPKLDARIDEALDLTDEARTKAFQEILAEVHDGIAVDIPMFHMIGYTRVGP
GLDWRPNLTTNSEIPLAEIRLKK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcagaactgtgctgtccgtcgcctgcgccatgctgatggcgtccgcggccctg
cccgcggcggcccagacgggaggcgacgccatcacggtcgtcctgccggagcagccgggc
aatctcgagccgtgcggcagcatcatgaccaatgtcggccagatcctgaaccagaacgtc
accgagccgttgacggtcatcgacccggagaacgggacgccccggcccaagctcgcgacg
tcgtgggaacgggtcgacgacacgacctggcgctttcgcctgcgcgacggcgtgaagttc
cacgacggcgccgacttcgacgccgaggcggcggccttctccatccggcggatgaccagc
ggggccttcacctgcaacaacatcgccaagttcggcagcgcgaagctgacggtgaccccg
gtggacaagtccaccctggagatccggaccgaaacggcggaaccgatcctgcccgctctg
ctgagcgtcgcgatgatggtttcgccgaagacgccggccgaccgggcggtcaacgatccg
gtcggcaccgggccctacgagctggaaaccttcacgccccagacggtcgtcctggagccg
ttcgacggctactggggcgagacgcccgacatcgccaaggcgacctatgtctggcgcgcg
gagtcctcgctccgggccgcgatggtccagaccggggaggcccagctgacgcccgcgatc
gcgatccaggatgccaccgacccggagacggacttctcgtacctgaactccgagaccacc
gcgatccggatcgacaccggcaaggcgccgctcgacgacgtgcgcgtccgtaaggcgctc
aacctcgcgatcgactggcagggcatggcggagctgttcggcgacgacgtgctgcgcgct
tcccagatggtcgtccccggcatcaacggccacaacgcgtccgtcgagccctggacctac
gatccggaccgggcggcgaagctcctggaggaggcgcgggcggacggcgtcccggtcggt
accgagatcaagctgatcggccgcaacggcatctatcccaacggcaacgaggcgctggag
gcgatgatgacgatgtgggaggccgtcggcttcaacatcgatctgaccatgctcgacgtg
gcggactggacccggtacctgcagaagcccttcccgcaggagcgcggccccaccctgctg
cagatcatgcacgacaacaacaagggcgacgccgccttcacgatcccgatcttctaccat
tcgtcgggtcagtacgcgacattcgaagatccgaagctggacgcgcggatcgacgaggcg
ctggacctgaccgacgaggcccggaccaaggcgttccaggagatcctggcggaagtgcat
gacgggatcgcggtggatatcccgatgttccacatgatcggctacacccgcgtcgggccc
ggcctcgactggcgccccaacctgacgaccaacagcgagatcccgctggcggaaatccgc
ctgaagaagtga
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